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RPS16
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  • RPS16
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:834.1 nTPM
FANTOM5:279.4 Scaled Tags Per Million
Pig:496.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA064222
Glial cells Low
Neuronal cells High

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 834.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 834.1
Samples: 246

Max nTPM: 2010.6
Min nTPM: 277.6
Std nTPM: 234.5
Median nTPM: 817.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2010.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1753.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1640.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1563.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1478.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1454.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1424.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1393.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1348.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1316.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1261.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1253.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1252.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1243.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1210.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1187.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1187.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1167.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1159.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1152.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1142.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1142.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1123.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1101.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1098.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1097.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1058.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1058.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1052.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1051.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1048.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1042.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1040.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1038.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1037.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1036.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1033.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1032.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1026.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1026.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1019.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1017.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1005.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1004.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1003.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1002.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 988.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 984.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 983.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 982.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 981.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 977.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 977.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 974.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 969.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 963.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 963.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 961.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 959.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 952.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 946.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 945.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 944.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 943.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 932.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 932.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 931.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 931.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 929.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 926.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 926.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 924.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 923.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 920.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 919.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 918.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 912.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 906.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 905.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 904.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 904.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 898.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 894.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 893.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 888.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 875.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 871.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 868.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 867.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 866.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 865.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 863.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 859.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 858.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 857.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 853.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 853.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 850.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 850.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 849.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 848.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 848.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 847.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 847.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 847.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 845.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 845.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 840.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 839.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 838.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 834.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 832.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 832.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 831.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 831.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 831.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 830.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 829.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 828.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 825.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 825.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 821.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 819.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 815.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 814.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 813.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 813.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 812.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 811.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 808.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 800.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 799.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 796.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 793.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 791.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 789.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 788.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 787.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 784.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 784.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 784.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 781.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 780.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 776.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 773.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 768.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 763.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 761.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 760.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 747.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 746.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 744.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 742.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 735.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 735.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 735.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 734.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 731.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 730.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 729.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 726.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 726.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 723.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 723.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 722.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 722.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 721.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 720.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 719.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 718.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 713.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 712.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 711.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 710.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 709.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 706.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 706.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 703.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 699.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 699.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 692.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 692.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 690.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 684.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 680.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 680.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 674.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 672.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 671.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 665.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 660.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 659.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 654.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 651.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 646.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 645.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 642.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 642.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 639.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 637.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 637.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 635.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 634.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 633.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 628.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 628.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 628.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 623.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 622.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 622.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 616.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 616.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 612.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 610.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 605.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 604.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 602.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 597.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 592.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 587.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 579.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 576.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 575.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 572.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 564.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 562.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 561.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 560.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 557.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 548.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 538.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 538.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 532.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 527.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 503.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 498.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 497.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 484.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 478.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 468.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 459.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 439.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 393.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 368.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 367.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 277.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 279.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 279.4
FF:10164-103B2 76 years, female 279.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 496.2
Pig sample Sample description nTPM
Caudate
nTPM: 496.2
Samples: 4

Max nTPM: 554.4
Min nTPM: 435.1
Sample A Female 480.3
Sample B Female 554.4
Sample C Male 515.1
Sample D Male 435.1

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