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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:195.6 nTPM
FANTOM5:392.8 Scaled Tags Per Million
Pig:65.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA024305Antibody HPA052171Antibody CAB018655Antibody CAB040563Antibody CAB080077
Glial cells Not detectedMediumMediumNot detectedLow
Neuronal cells MediumMediumMediumHighMedium









CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 195.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 195.6
Samples: 246

Max nTPM: 367.8
Min nTPM: 93.7
Std nTPM: 56.1
Median nTPM: 193.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 367.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 334.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 333.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 324.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 323.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 313.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 312.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 298.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 290.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 290.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 289.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 287.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 287.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 286.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 285.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 284.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 284.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 284.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 283.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 282.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 281.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 280.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 278.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 277.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 273.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 273.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 273.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 271.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 270.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 267.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 266.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 262.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 262.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 260.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 260.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 259.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 259.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 259.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 256.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 256.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 254.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 254.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 253.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 251.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 251.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 248.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 248.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 247.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 245.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 245.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 244.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 243.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 243.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 241.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 241.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 241.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 240.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 239.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 238.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 236.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 236.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 235.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 235.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 234.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 233.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 231.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 230.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 230.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 229.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 228.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 228.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 227.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 226.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 226.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 226.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 222.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 222.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 221.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 221.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 221.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 221.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 220.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 219.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 218.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 218.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 217.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 217.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 216.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 216.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 216.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 215.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 214.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 213.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 213.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 212.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 211.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 211.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 211.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 209.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 208.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 208.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 208.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 207.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 207.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 204.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 203.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 202.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 202.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 201.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 201.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 200.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 200.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 199.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 198.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 198.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 197.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 196.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 194.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 194.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 194.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 193.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 193.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 193.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 193.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 192.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 191.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 191.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 191.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 190.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 187.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 186.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 186.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 185.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 184.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 182.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 182.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 181.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 180.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 180.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 180.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 178.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 178.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 177.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 177.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 175.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 174.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 174.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 174.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 173.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 173.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 173.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 173.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 172.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 171.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 171.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 170.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 170.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 170.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 169.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 169.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 168.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 166.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 165.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 163.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 162.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 162.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 162.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 161.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 161.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 161.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 161.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 161.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 161.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 160.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 159.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 159.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 157.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 157.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 156.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 155.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 155.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 155.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 155.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 154.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 154.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 152.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 151.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 151.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 150.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 149.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 148.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 145.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 143.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 142.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 141.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 141.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 140.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 139.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 139.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 138.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 138.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 138.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 137.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 135.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 134.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 134.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 133.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 132.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 132.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 132.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 129.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 128.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 127.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 127.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 126.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 126.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 126.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 125.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 125.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 124.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 123.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 123.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 122.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 122.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 122.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 121.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 120.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 119.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 118.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 117.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 117.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 117.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 117.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 113.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 110.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 110.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 109.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 108.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 104.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 103.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 97.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 95.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 95.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 93.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 392.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 392.8
FF:10164-103B2 76 years, female 392.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 65.2
Pig sample Sample description nTPM
Caudate
nTPM: 65.2
Samples: 4

Max nTPM: 77.0
Min nTPM: 52.6
Sample A Female 52.6
Sample B Female 67.1
Sample C Male 77.0
Sample D Male 63.9

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