HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:438.3 nTPM
HPA:438.3 nTPM
GTEx:474.5 nTPM
FANTOM5:169.3 Scaled Tags Per Million
Pig:429.9 nTPM
Mouse:871.2 nTPM
Allen mouse:32.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028970Antibody HPA028971
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 438.3
Sample id Sample description nTPM
Hippocampus
nTPM: 382.6
1911 Female, age 85, right hemisphere 398.6
1898 Male, age 80, left hemisphere 398.5
2621 Female, age 67, right hemisphere 396.6
1855 Male, age 76, left hemisphere 393.9
2529 Female, age 94, left hemisphere 378.2
2148 Female, age 91, left hemisphere 329.7
Dentate gyrus
nTPM: 419.9
2530 Female, age 94, left hemisphere 579.8
2010 Male, age 76, both hemispheres 440.3
2531 Female, age 67, both hemispheres 382.7
2246 Female, age 85, both hemispheres 380.9
2528 Male, age 74, both hemispheres 377.3
1927 Female, age 91, both hemispheres 358.5
Entorhinal gyrus
nTPM: 438.3
2117 Female, age 91, right hemisphere 505.6
2764 Male, age 80, right hemisphere 503.0
2613 Female, age 94, left hemisphere 466.6
1938 Female, age 85, left hemisphere 413.3
1787 Male, age 76, left hemisphere 406.0
2686 Male, age 75, right hemisphere 335.0
Hippocampus, CA1
nTPM: 394.6
2749 Male, age 80, left hemisphere 443.0
2045 Male, age 76, both hemispheres 417.5
1873 Female, age 85, both hemispheres 394.1
2527 Male, age 74, both hemispheres 371.2
2082 Female, age 91, right hemisphere 347.1
Hippocampus, CA2
nTPM: 405.5
1963 Male, age 80, left hemisphere 442.2
2249 Male, age 74, both hemispheres 430.4
2437 Female, age 94, left hemisphere 411.5
1940 Female, age 85, left hemisphere 400.5
1892 Male, age 76, both hemispheres 398.4
2113 Female, age 91, right hemisphere 350.0
Hippocampus, CA3
nTPM: 373.5
2620 Female, age 94, left hemisphere 436.9
1891 Female, age 85, both hemispheres 426.8
1867 Male, age 76, both hemispheres 392.0
2137 Male, age 80, left hemisphere 390.4
2436 Male, age 74, both hemispheres 313.4
2861 Female, age 67, both hemispheres 281.7
Parahippocampal cortex
nTPM: 367.3
2532 Female, age 72, left hemisphere 427.2
1990 Female, age 91, right hemisphere 412.0
1850 Male, age 80, both hemispheres 404.0
1933 Female, age 85, both hemispheres 393.3
2018 Male, age 76, both hemispheres 379.5
2692 Male, age 74, both hemispheres 372.9
2245 Female, age 91, both hemispheres 370.5
2693 Female, age 94, both hemispheres 349.1
2250 Female, age 67, right hemisphere 310.1
2622 Female, age 67, right hemisphere 254.6
Perirhinal gyrus
nTPM: 398.3
1794 Male, age 80, right hemisphere 432.7
2521 Female, age 94, right hemisphere 404.7
2848 Male, age 76, right hemisphere 396.8
1841 Female, age 85, right hemisphere 384.6
1847 Female, age 91, left hemisphere 372.5
Subiculum
nTPM: 438.3
2042 Male, age 76, both hemispheres 544.6
1901 Male, age 80, both hemispheres 495.3
1977 Female, age 85, both hemispheres 485.6
2438 Female, age 94, left hemisphere 392.4
2619 Male, age 74, both hemispheres 367.6
2729 Female, age 91, right hemisphere 344.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 474.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 474.5
Samples: 197

Max nTPM: 1615.1
Min nTPM: 22.0
Std nTPM: 207.6
Median nTPM: 427.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1615.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1119.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 1105.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1074.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1012.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 998.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 922.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 901.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 874.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 863.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 854.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.3
FF:10169-103B7 60 years, female 170.5
FF:10153-102I9 76 years, female 168.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 429.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 429.9
Samples: 4

Max nTPM: 603.6
Min nTPM: 253.3
Sample A Female 603.6
Sample B Female 406.0
Sample C Male 456.6
Sample D Male 253.3
Entorhinal cortex
nTPM: 264.9
Samples: 4

Max nTPM: 299.8
Min nTPM: 240.3
Sample A Female 299.8
Sample B Female 265.8
Sample C Male 253.8
Sample D Male 240.3
Subiculum
nTPM: 256.2
Samples: 4

Max nTPM: 324.2
Min nTPM: 222.6
Sample A Female 324.2
Sample B Female 245.4
Sample C Male 232.7
Sample D Male 222.6
Ventral hippocampus
nTPM: 333.9
Samples: 4

Max nTPM: 450.5
Min nTPM: 188.2
Sample A Female 343.8
Sample B Female 188.2
Sample C Male 352.9
Sample D Male 450.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 871.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 806.8
Samples: 4

Max nTPM: 913.6
Min nTPM: 739.9
Sample A Male 811.0
Sample B Male 762.6
Sample C Female 739.9
Sample D Female 913.6
Hippocampal formation
nTPM: 871.2
Samples: 4

Max nTPM: 1015.3
Min nTPM: 764.5
Sample A Male 764.5
Sample B Male 866.6
Sample C Female 1015.3
Sample D Female 838.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 32.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 32.8
69015613 Antisense, RP_050315_01_C12, Mouse strain C57BL/6J (56 days, male) 32.8

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