HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:111.3 nTPM
HPA:111.3 nTPM
GTEx:117.6 nTPM
FANTOM5:135.1 Scaled Tags Per Million
Pig:5.1 nTPM
Mouse:114.5 nTPM
Allen mouse:23.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077966
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 111.3
Sample id Sample description nTPM
Hippocampus
nTPM: 99.0
2621 Female, age 67, right hemisphere 111.3
1855 Male, age 76, left hemisphere 108.9
2148 Female, age 91, left hemisphere 103.8
1898 Male, age 80, left hemisphere 95.9
1911 Female, age 85, right hemisphere 87.3
2529 Female, age 94, left hemisphere 86.7
Dentate gyrus
nTPM: 95.4
2531 Female, age 67, both hemispheres 132.7
2246 Female, age 85, both hemispheres 91.9
1927 Female, age 91, both hemispheres 91.4
2010 Male, age 76, both hemispheres 91.3
2530 Female, age 94, left hemisphere 88.0
2528 Male, age 74, both hemispheres 77.1
Entorhinal gyrus
nTPM: 65.7
2613 Female, age 94, left hemisphere 90.5
1938 Female, age 85, left hemisphere 68.3
1787 Male, age 76, left hemisphere 65.0
2764 Male, age 80, right hemisphere 59.6
2686 Male, age 75, right hemisphere 59.5
2117 Female, age 91, right hemisphere 51.5
Hippocampus, CA1
nTPM: 108.6
2749 Male, age 80, left hemisphere 152.8
2045 Male, age 76, both hemispheres 116.3
1873 Female, age 85, both hemispheres 95.8
2527 Male, age 74, both hemispheres 92.5
2082 Female, age 91, right hemisphere 85.6
Hippocampus, CA2
nTPM: 76.2
1963 Male, age 80, left hemisphere 89.6
1892 Male, age 76, both hemispheres 85.1
2113 Female, age 91, right hemisphere 81.9
2249 Male, age 74, both hemispheres 68.7
2437 Female, age 94, left hemisphere 68.6
1940 Female, age 85, left hemisphere 63.2
Hippocampus, CA3
nTPM: 111.3
2861 Female, age 67, both hemispheres 155.6
2137 Male, age 80, left hemisphere 154.9
2620 Female, age 94, left hemisphere 141.5
1867 Male, age 76, both hemispheres 84.6
2436 Male, age 74, both hemispheres 66.6
1891 Female, age 85, both hemispheres 64.8
Parahippocampal cortex
nTPM: 61.8
2245 Female, age 91, both hemispheres 89.2
2018 Male, age 76, both hemispheres 74.0
1933 Female, age 85, both hemispheres 63.8
2622 Female, age 67, right hemisphere 63.0
2250 Female, age 67, right hemisphere 62.4
2693 Female, age 94, both hemispheres 59.4
2692 Male, age 74, both hemispheres 55.0
1850 Male, age 80, both hemispheres 52.0
1990 Female, age 91, right hemisphere 50.9
2532 Female, age 72, left hemisphere 48.5
Perirhinal gyrus
nTPM: 64.1
2521 Female, age 94, right hemisphere 83.5
1847 Female, age 91, left hemisphere 73.1
1794 Male, age 80, right hemisphere 57.8
2848 Male, age 76, right hemisphere 53.5
1841 Female, age 85, right hemisphere 52.7
Subiculum
nTPM: 65.2
1901 Male, age 80, both hemispheres 84.4
2042 Male, age 76, both hemispheres 72.4
2729 Female, age 91, right hemisphere 71.3
1977 Female, age 85, both hemispheres 65.2
2619 Male, age 74, both hemispheres 51.1
2438 Female, age 94, left hemisphere 46.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 117.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 117.6
Samples: 197

Max nTPM: 482.8
Min nTPM: 23.7
Std nTPM: 62.7
Median nTPM: 109.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 482.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 262.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 262.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 261.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 251.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 246.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 241.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 234.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 232.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 231.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 230.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 135.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.1
FF:10169-103B7 60 years, female 178.9
FF:10153-102I9 76 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 5.8
Min nTPM: 3.8
Sample A Female 5.3
Sample B Female 5.8
Sample C Male 3.8
Sample D Male 5.7
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.3
Sample A Female 3.7
Sample B Female 3.3
Sample C Male 3.5
Sample D Male 4.4
Subiculum
nTPM: 3.8
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.4
Sample A Female 3.4
Sample B Female 3.9
Sample C Male 4.3
Sample D Male 3.5
Ventral hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 4.6
Sample C Male 4.8
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.8
Samples: 4

Max nTPM: 94.2
Min nTPM: 71.5
Sample A Male 74.3
Sample B Male 71.5
Sample C Female 83.0
Sample D Female 94.2
Hippocampal formation
nTPM: 114.5
Samples: 4

Max nTPM: 131.1
Min nTPM: 97.4
Sample A Male 97.4
Sample B Male 131.1
Sample C Female 121.2
Sample D Female 108.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.4
67765715 Antisense, RP_040916_01_E10, Mouse strain C57BL/6J (56 days, male) 23.8
71836832 Antisense, RP_051017_02_B07, Mouse strain C57BL/6J (56 days, male) 23.0

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The Human Protein Atlas

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