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PPP2R1A
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:305.0 nTPM
HPA:305.0 nTPM
GTEx:248.7 nTPM
FANTOM5:149.1 Scaled Tags Per Million
Pig:169.6 nTPM
Mouse:466.3 nTPM
Allen mouse:19.0 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 305.0
Sample id Sample description nTPM
Amygdala
nTPM: 292.1
2814 Male, age 76, right hemisphere 318.8
2517 Female, age 94, left hemisphere 294.0
1987 Female, age 91, left hemisphere 290.2
2514 Male, age 75, right hemisphere 279.6
2695 Female, age 67, right hemisphere 278.0
Basal amygdala
nTPM: 303.4
2685 Female, age 94, left hemisphere 323.9
1955 Male, age 76, both hemispheres 310.3
2243 Female, age 91, right hemisphere 305.3
2110 Male, age 80, left hemisphere 303.9
2609 Male, age 75, right hemisphere 289.5
2827 Female, age 67, right hemisphere 287.4
Central amygdala
nTPM: 305.0
1905 Male, age 76, both hemispheres 327.2
2826 Female, age 94, left hemisphere 324.4
2239 Male, age 80, left hemisphere 295.7
2515 Male, age 75, right hemisphere 293.3
2701 Female, age 91, right hemisphere 284.3
Corticomedial amygdala
nTPM: 299.3
2829 Male, age 80, left hemisphere 317.4
2242 Female, age 91, right hemisphere 309.5
2429 Female, age 94, left hemisphere 300.0
2240 Male, age 76, both hemispheres 292.3
2428 Male, age 75, right hemisphere 290.2
2535 Female, age 67, right hemisphere 286.8
Lateral amygdala
nTPM: 301.2
2534 Female, age 94, left hemisphere 337.2
1883 Male, age 76, both hemispheres 325.3
2255 Female, age 91, right hemisphere 293.2
2256 Male, age 80, left hemisphere 292.9
2516 Male, age 75, right hemisphere 284.7
2830 Female, age 67, right hemisphere 273.9
Stria terminalis, bed nucleus
nTPM: 300.1
1974 Female, age 91, both hemispheres 313.3
2486 Female, age 94, both hemispheres 310.1
2201 Male, age 74, unknown 276.9

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 248.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 248.7
Samples: 152

Max nTPM: 527.7
Min nTPM: 75.2
Std nTPM: 75.5
Median nTPM: 239.7
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 527.7
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 487.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 452.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 451.4
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 417.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 412.3
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 388.5
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 387.6
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 381.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 380.2
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 378.6
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 378.2
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 356.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 352.6
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 349.8
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 348.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 333.5
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 329.5
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 329.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 324.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 319.9
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 312.0
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 308.2
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 306.6
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 306.3
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 302.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 301.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 299.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 299.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 298.2
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 298.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 297.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 296.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 296.4
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 295.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 293.3
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 288.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 287.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 286.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 286.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 283.2
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 283.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 282.2
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 279.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 279.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 278.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 278.4
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 278.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 277.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 276.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 275.5
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 275.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 274.9
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 274.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 273.9
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 273.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 270.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 265.1
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 261.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 260.4
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 258.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 257.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 256.6
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 256.2
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 255.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 251.7
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 250.9
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 250.4
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 250.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 250.0
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 248.0
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 247.7
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 245.2
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 244.5
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 243.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 240.9
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 238.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 238.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 237.9
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 236.5
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 235.3
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 232.2
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 231.6
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 230.7
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 230.3
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 229.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 228.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 228.2
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 225.3
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 222.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 222.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 221.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 220.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 220.4
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 215.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 214.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 214.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 214.0
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 212.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 212.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 212.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 211.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 211.8
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 211.6
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 210.2
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 209.5
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 206.2
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 205.9
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 204.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 202.4
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 201.9
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 201.8
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 201.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 199.3
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 198.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 197.1
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 195.6
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 195.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 195.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 194.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 194.5
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 191.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 191.0
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 187.5
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 186.7
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 185.6
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 185.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 184.2
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 183.0
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 182.1
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 179.9
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 179.4
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 178.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 177.6
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 177.4
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 171.7
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 166.8
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 163.4
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 156.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 155.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 151.9
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 147.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 145.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 140.1
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 139.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 139.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 130.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 127.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 110.2
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 89.4
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 87.8
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 75.2
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 149.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 149.1
FF:10151-102I7 76 years, female 149.1

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 169.6
Pig sample Sample description nTPM
Amygdala
nTPM: 169.6
Samples: 4

Max nTPM: 246.3
Min nTPM: 115.2
Sample A Female 246.3
Sample B Female 115.2
Sample C Male 153.7
Sample D Male 163.2

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 466.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 466.3
Samples: 4

Max nTPM: 503.9
Min nTPM: 447.7
Sample A Male 503.9
Sample B Male 453.2
Sample C Female 447.7
Sample D Female 460.4

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 19.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 19.0
68667946 Antisense, RP_050203_01_B05, Mouse strain C57BL/6J (56 days, male) 19.0

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