HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.4 nTPM
HPA:59.4 nTPM
GTEx:127.2 nTPM
FANTOM5:55.9 Scaled Tags Per Million
Pig:107.5 nTPM
Mouse:87.2 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007033Antibody HPA012049
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.4
Sample id Sample description nTPM
Hippocampus
nTPM: 59.4
1898 Male, age 80, left hemisphere 68.8
2621 Female, age 67, right hemisphere 67.8
1855 Male, age 76, left hemisphere 63.5
2148 Female, age 91, left hemisphere 56.0
2529 Female, age 94, left hemisphere 51.1
1911 Female, age 85, right hemisphere 49.5
Dentate gyrus
nTPM: 51.8
2010 Male, age 76, both hemispheres 64.1
1927 Female, age 91, both hemispheres 59.6
2531 Female, age 67, both hemispheres 51.4
2530 Female, age 94, left hemisphere 49.9
2528 Male, age 74, both hemispheres 47.4
2246 Female, age 85, both hemispheres 38.1
Entorhinal gyrus
nTPM: 59.2
2613 Female, age 94, left hemisphere 83.2
2764 Male, age 80, right hemisphere 63.9
1787 Male, age 76, left hemisphere 54.6
1938 Female, age 85, left hemisphere 54.6
2686 Male, age 75, right hemisphere 51.8
2117 Female, age 91, right hemisphere 47.1
Hippocampus, CA1
nTPM: 53.3
2749 Male, age 80, left hemisphere 68.8
2045 Male, age 76, both hemispheres 59.2
1873 Female, age 85, both hemispheres 50.7
2527 Male, age 74, both hemispheres 45.8
2082 Female, age 91, right hemisphere 42.1
Hippocampus, CA2
nTPM: 55.1
1963 Male, age 80, left hemisphere 80.3
1892 Male, age 76, both hemispheres 65.8
2437 Female, age 94, left hemisphere 58.1
1940 Female, age 85, left hemisphere 47.7
2113 Female, age 91, right hemisphere 41.9
2249 Male, age 74, both hemispheres 36.7
Hippocampus, CA3
nTPM: 56.6
2861 Female, age 67, both hemispheres 76.0
2620 Female, age 94, left hemisphere 63.1
1867 Male, age 76, both hemispheres 62.3
2137 Male, age 80, left hemisphere 56.0
1891 Female, age 85, both hemispheres 50.0
2436 Male, age 74, both hemispheres 32.4
Parahippocampal cortex
nTPM: 50.9
2018 Male, age 76, both hemispheres 61.0
2693 Female, age 94, both hemispheres 59.1
2622 Female, age 67, right hemisphere 54.1
1850 Male, age 80, both hemispheres 54.0
2692 Male, age 74, both hemispheres 52.0
1933 Female, age 85, both hemispheres 50.3
2245 Female, age 91, both hemispheres 48.7
2532 Female, age 72, left hemisphere 47.7
1990 Female, age 91, right hemisphere 44.5
2250 Female, age 67, right hemisphere 37.5
Perirhinal gyrus
nTPM: 58.4
2521 Female, age 94, right hemisphere 71.9
1847 Female, age 91, left hemisphere 61.9
1794 Male, age 80, right hemisphere 60.9
1841 Female, age 85, right hemisphere 53.6
2848 Male, age 76, right hemisphere 43.8
Subiculum
nTPM: 50.4
2042 Male, age 76, both hemispheres 58.3
1901 Male, age 80, both hemispheres 56.7
2619 Male, age 74, both hemispheres 52.5
1977 Female, age 85, both hemispheres 51.2
2729 Female, age 91, right hemisphere 45.4
2438 Female, age 94, left hemisphere 38.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 127.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.2
Samples: 197

Max nTPM: 316.9
Min nTPM: 20.6
Std nTPM: 44.9
Median nTPM: 127.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 316.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 266.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 245.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 233.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 227.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 218.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 217.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 214.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 206.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 204.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 204.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.9
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 51.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 98.4
Samples: 4

Max nTPM: 127.4
Min nTPM: 71.2
Sample A Female 127.4
Sample B Female 101.3
Sample C Male 93.8
Sample D Male 71.2
Entorhinal cortex
nTPM: 107.5
Samples: 4

Max nTPM: 127.4
Min nTPM: 89.2
Sample A Female 115.7
Sample B Female 97.8
Sample C Male 127.4
Sample D Male 89.2
Subiculum
nTPM: 85.9
Samples: 4

Max nTPM: 122.6
Min nTPM: 64.6
Sample A Female 122.6
Sample B Female 76.9
Sample C Male 79.3
Sample D Male 64.6
Ventral hippocampus
nTPM: 92.0
Samples: 4

Max nTPM: 121.0
Min nTPM: 63.9
Sample A Female 78.0
Sample B Female 63.9
Sample C Male 104.9
Sample D Male 121.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.2
Samples: 4

Max nTPM: 94.5
Min nTPM: 79.5
Sample A Male 92.7
Sample B Male 94.5
Sample C Female 81.9
Sample D Female 79.5
Hippocampal formation
nTPM: 62.8
Samples: 4

Max nTPM: 65.5
Min nTPM: 56.1
Sample A Male 64.3
Sample B Male 56.1
Sample C Female 65.1
Sample D Female 65.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
74658055 Antisense, RP_060220_04_C10, Mouse strain C57BL/6J (56 days, male) 9.8
69548819 Antisense, RP_050426_02_D04, Mouse strain C57BL/6J (56 days, male) 6.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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