HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:119.5 nTPM
HPA:119.5 nTPM
GTEx:106.6 nTPM
FANTOM5:94.2 Scaled Tags Per Million
Pig:64.8 nTPM
Mouse:194.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024258Antibody HPA058593Antibody CAB004670
Glial cells LowLowHigh
Neuronal cells MediumMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 119.5
Sample id Sample description nTPM
Hippocampus
nTPM: 113.5
1898 Male, age 80, left hemisphere 118.7
2529 Female, age 94, left hemisphere 116.9
1855 Male, age 76, left hemisphere 116.1
2621 Female, age 67, right hemisphere 115.8
2148 Female, age 91, left hemisphere 107.1
1911 Female, age 85, right hemisphere 106.4
Dentate gyrus
nTPM: 115.3
2010 Male, age 76, both hemispheres 127.4
1927 Female, age 91, both hemispheres 119.9
2530 Female, age 94, left hemisphere 118.1
2246 Female, age 85, both hemispheres 114.5
2531 Female, age 67, both hemispheres 106.1
2528 Male, age 74, both hemispheres 106.0
Entorhinal gyrus
nTPM: 111.3
1938 Female, age 85, left hemisphere 121.0
2764 Male, age 80, right hemisphere 115.2
1787 Male, age 76, left hemisphere 115.0
2117 Female, age 91, right hemisphere 111.4
2686 Male, age 75, right hemisphere 103.0
2613 Female, age 94, left hemisphere 102.3
Hippocampus, CA1
nTPM: 119.5
2045 Male, age 76, both hemispheres 136.2
2749 Male, age 80, left hemisphere 128.7
1873 Female, age 85, both hemispheres 117.1
2527 Male, age 74, both hemispheres 109.0
2082 Female, age 91, right hemisphere 106.4
Hippocampus, CA2
nTPM: 115.7
1892 Male, age 76, both hemispheres 135.6
1963 Male, age 80, left hemisphere 117.0
2437 Female, age 94, left hemisphere 112.4
2249 Male, age 74, both hemispheres 112.0
1940 Female, age 85, left hemisphere 109.4
2113 Female, age 91, right hemisphere 108.0
Hippocampus, CA3
nTPM: 115.3
1867 Male, age 76, both hemispheres 132.0
2137 Male, age 80, left hemisphere 121.0
1891 Female, age 85, both hemispheres 113.9
2436 Male, age 74, both hemispheres 113.8
2620 Female, age 94, left hemisphere 108.3
2861 Female, age 67, both hemispheres 102.9
Parahippocampal cortex
nTPM: 113.5
2018 Male, age 76, both hemispheres 124.8
1850 Male, age 80, both hemispheres 119.7
1933 Female, age 85, both hemispheres 116.6
2250 Female, age 67, right hemisphere 116.1
1990 Female, age 91, right hemisphere 115.3
2532 Female, age 72, left hemisphere 114.4
2245 Female, age 91, both hemispheres 113.3
2693 Female, age 94, both hemispheres 105.6
2622 Female, age 67, right hemisphere 105.1
2692 Male, age 74, both hemispheres 103.8
Perirhinal gyrus
nTPM: 118.7
1841 Female, age 85, right hemisphere 125.8
2848 Male, age 76, right hemisphere 120.7
1847 Female, age 91, left hemisphere 119.5
1794 Male, age 80, right hemisphere 119.4
2521 Female, age 94, right hemisphere 108.0
Subiculum
nTPM: 115.0
2438 Female, age 94, left hemisphere 120.1
2042 Male, age 76, both hemispheres 119.9
1977 Female, age 85, both hemispheres 118.6
1901 Male, age 80, both hemispheres 118.3
2619 Male, age 74, both hemispheres 110.0
2729 Female, age 91, right hemisphere 102.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.6
Samples: 197

Max nTPM: 289.2
Min nTPM: 46.6
Std nTPM: 30.1
Median nTPM: 101.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 289.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 240.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 228.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 201.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 176.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 176.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 162.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 159.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 156.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 152.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 150.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.2
FF:10169-103B7 60 years, female 100.4
FF:10153-102I9 76 years, female 88.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.8
Samples: 4

Max nTPM: 81.3
Min nTPM: 54.7
Sample A Female 81.3
Sample B Female 63.0
Sample C Male 60.1
Sample D Male 54.7
Entorhinal cortex
nTPM: 63.7
Samples: 4

Max nTPM: 66.7
Min nTPM: 60.3
Sample A Female 63.7
Sample B Female 66.7
Sample C Male 64.0
Sample D Male 60.3
Subiculum
nTPM: 60.6
Samples: 4

Max nTPM: 75.5
Min nTPM: 54.3
Sample A Female 75.5
Sample B Female 57.9
Sample C Male 54.7
Sample D Male 54.3
Ventral hippocampus
nTPM: 60.5
Samples: 4

Max nTPM: 66.8
Min nTPM: 47.1
Sample A Female 65.6
Sample B Female 47.1
Sample C Male 66.8
Sample D Male 62.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 194.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 188.0
Samples: 4

Max nTPM: 199.3
Min nTPM: 175.0
Sample A Male 175.0
Sample B Male 199.3
Sample C Female 183.1
Sample D Female 194.4
Hippocampal formation
nTPM: 194.4
Samples: 4

Max nTPM: 207.3
Min nTPM: 181.0
Sample A Male 207.3
Sample B Male 189.7
Sample C Female 199.4
Sample D Female 181.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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