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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:894.1 nTPM
HPA:894.1 nTPM
FANTOM5:1063.3 Scaled Tags Per Million
Pig:232.6 nTPM
Allen mouse:0.3 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 894.1
Sample id Sample description nTPM
Area postrema
nTPM: 875.0
2799 Male, age 61, both hemispheres 989.8
2306 Male, age 80, both hemispheres 829.1
2054 Male, age 76, both hemispheres 806.0
Cuneate nuclei
nTPM: 770.1
2376 Male, age 61, both hemispheres 823.6
2131 Male, age 76, both hemispheres 766.2
2381 Male, age 80, both hemispheres 720.4
Dorsal medullary reticular nucleus
nTPM: 785.3
2040 Female, age 85, both hemispheres 845.2
2088 Male, age 76, both hemispheres 756.8
2373 Male, age 61, both hemispheres 754.1
Dorsal motor vagal complex
nTPM: 841.0
2000 Male, age 74, unknown 923.4
2813 Female, age 72, unknown 874.8
2844 Male, age 55, unknown 859.2
2797 Male, age 61, both hemispheres 841.5
2133 Female, age 91, both hemispheres 841.0
2185 Male, age 76, both hemispheres 841.0
2643 Male, age 74, both hemispheres 803.7
2807 Female, age 85, both hemispheres 743.4
Gigantocellular reticular nuclei, medullary
nTPM: 790.6
2314 Male, age 61, both hemispheres 847.9
2462 Male, age 74, both hemispheres 824.3
2022 Male, age 76, right hemisphere 801.6
2310 Male, age 80, both hemispheres 775.8
2387 Female, age 91, both hemispheres 753.4
1876 Female, age 85, both hemispheres 740.6
Gigantocellular reticular nuclei, pars
nTPM: 790.0
2336 Male, age 61, both hemispheres 836.7
2084 Female, age 85, both hemispheres 799.2
2330 Male, age 80, both hemispheres 786.3
2706 Male, age 80, both hemispheres 780.8
2168 Male, age 76, both hemispheres 746.8
Inferior olive
nTPM: 894.1
2085 Female, age 85, both hemispheres 974.1
2628 Female, age 91, both hemispheres 923.7
2563 Male, age 74, both hemispheres 897.9
2178 Male, age 61, both hemispheres 837.7
2379 Male, age 80, both hemispheres 837.2
Lateral medullary reticular nucleus
nTPM: 834.1
2190 Female, age 85, both hemispheres 871.1
2804 Female, age 91, both hemispheres 855.7
2305 Male, age 74, both hemispheres 839.8
2374 Male, age 61, both hemispheres 837.9
2044 Male, age 76, both hemispheres 808.7
2852 Male, age 80, both hemispheres 791.1
Medial vestibular nucleus
nTPM: 824.2
2624 Male, age 61, both hemispheres 945.4
2134 Male, age 76, both hemispheres 856.6
2801 Male, age 74, both hemispheres 816.3
2743 Female, age 85, both hemispheres 785.6
2803 Female, age 91, both hemispheres 780.6
2093 Male, age 80, both hemispheres 760.9
Motor hypoglossal nucleus
nTPM: 799.0
2182 Male, age 80, both hemispheres 816.7
2461 Male, age 61, both hemispheres 805.0
2132 Female, age 85, both hemispheres 796.1
2125 Female, age 91, both hemispheres 792.1
2277 Male, age 76, both hemispheres 785.0
Nucleus ambiguus
nTPM: 824.1
2096 Female, age 85, both hemispheres 833.7
2071 Male, age 76, both hemispheres 814.5
Nucleus cuneatus
nTPM: 790.1
2564 Male, age 74, both hemispheres 825.5
2562 Male, age 61, both hemispheres 820.9
2808 Female, age 85, both hemispheres 783.5
2100 Male, age 76, both hemispheres 780.9
2805 Female, age 91, both hemispheres 771.7
2380 Male, age 80, both hemispheres 758.0
Nucleus gracilis
nTPM: 800.5
2627 Male, age 74, both hemispheres 880.6
2299 Female, age 85, both hemispheres 786.3
2382 Male, age 80, both hemispheres 734.7
Nucleus raphe magnus
nTPM: 779.7
2172 Female, age 85, both hemispheres 829.5
2455 Male, age 74, both hemispheres 813.6
2328 Male, age 80, both hemispheres 774.6
2051 Male, age 76, both hemispheres 769.9
2160 Male, age 61, both hemispheres 754.7
2459 Female, age 91, both hemispheres 736.1
Nucleus raphe obscurus
nTPM: 794.8
2845 Female, age 85, midline 831.8
2800 Male, age 61, midline 795.8
2142 Male, age 76, midline 756.8
Nucleus raphe pallidus
nTPM: 826.0
2183 Male, age 80, midline 889.6
1924 Male, age 61, midline 877.0
2145 Male, age 76, midline 711.5
Nucleus tractus solitarii
nTPM: 807.0
2191 Female, age 85, both hemispheres 843.5
2144 Female, age 91, right hemisphere 819.2
2307 Male, age 80, both hemispheres 791.8
2656 Male, age 76, both hemispheres 773.3
Parvicellular reticular nuclei
nTPM: 789.5
2119 Male, age 80, both hemispheres 850.4
2558 Male, age 74, both hemispheres 763.7
2095 Male, age 76, both hemispheres 754.5
Parvicellular reticular nuclei, medullary
nTPM: 826.1
2189 Female, age 91, both hemispheres 851.9
2091 Female, age 85, both hemispheres 851.2
2181 Male, age 80, left hemisphere 775.1
Peritrigeminal nucleus
nTPM: 802.0
2067 Female, age 85, both hemispheres 826.4
2179 Male, age 61, both hemispheres 798.8
2136 Male, age 76, both hemispheres 780.9
Prepositus hypoglossal nucleus
nTPM: 806.5
2086 Male, age 80, both hemispheres 841.5
2855 Female, age 85, right hemisphere 771.6
Spinal trigeminal nucleus, caudal
nTPM: 805.8
2390 Female, age 91, both hemispheres 887.2
2312 Male, age 61, both hemispheres 810.1
2447 Male, age 76, both hemispheres 782.9
2308 Male, age 80, both hemispheres 775.1
2642 Male, age 74, both hemispheres 773.8
Spinal trigeminal nucleus, interpolar
nTPM: 805.3
2625 Male, age 61, both hemispheres 906.3
2033 Male, age 80, both hemispheres 816.9
2389 Female, age 91, both hemispheres 793.6
2066 Male, age 76, right hemisphere 779.5
2386 Female, age 85, both hemispheres 730.1
Spinal vestibular nucleus
nTPM: 794.0
2796 Male, age 61, both hemispheres 867.6
2780 Male, age 80, both hemispheres 816.4
2186 Female, age 91, both hemispheres 793.5
2748 Male, age 76, both hemispheres 781.5
2806 Female, age 85, both hemispheres 770.7
2384 Male, age 74, both hemispheres 734.2
Ventral medullary reticular nucleus
nTPM: 750.8
2372 Male, age 61, both hemispheres 765.8
2060 Male, age 76, both hemispheres 735.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 810.0
2302 Female, age 91, both hemispheres 866.5
2180 Male, age 61, both hemispheres 824.4
1986 Male, age 76, both hemispheres 799.8
2741 Female, age 85, both hemispheres 783.6
2118 Male, age 80, both hemispheres 775.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 1063.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 1063.3
FF:10155-103A2 76 years, female 1388.6
FF:10174-103C3 60 years, female 975.1
FF:10038-101F2 18-64 years, mixed 826.1

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 232.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 232.6
Samples: 4

Max nTPM: 284.1
Min nTPM: 176.7
Sample A Female 176.7
Sample B Female 243.5
Sample C Male 226.2
Sample D Male 284.1

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.3
74363357 Antisense, RP_051121_02_H03, Mouse strain C57BL/6J (56 days, male) 0.3
73514683 Antisense, RP_051121_02_H03, Mouse strain C57BL/6J (56 days, male) 0.3

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