HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:62.0 nTPM
HPA:62.0 nTPM
GTEx:74.3 nTPM
FANTOM5:11.7 Scaled Tags Per Million
Pig:101.1 nTPM
Mouse:42.0 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.0
Sample id Sample description nTPM
Hippocampus
nTPM: 55.9
1898 Male, age 80, left hemisphere 57.4
2621 Female, age 67, right hemisphere 56.7
2148 Female, age 91, left hemisphere 56.3
2529 Female, age 94, left hemisphere 56.0
1911 Female, age 85, right hemisphere 54.9
1855 Male, age 76, left hemisphere 53.8
Dentate gyrus
nTPM: 57.0
2010 Male, age 76, both hemispheres 63.5
2530 Female, age 94, left hemisphere 59.6
2531 Female, age 67, both hemispheres 56.6
2246 Female, age 85, both hemispheres 55.7
2528 Male, age 74, both hemispheres 55.1
1927 Female, age 91, both hemispheres 51.3
Entorhinal gyrus
nTPM: 57.6
1938 Female, age 85, left hemisphere 65.9
2613 Female, age 94, left hemisphere 60.8
2117 Female, age 91, right hemisphere 57.3
1787 Male, age 76, left hemisphere 56.8
2686 Male, age 75, right hemisphere 53.2
2764 Male, age 80, right hemisphere 51.6
Hippocampus, CA1
nTPM: 53.9
2082 Female, age 91, right hemisphere 62.6
2527 Male, age 74, both hemispheres 54.8
1873 Female, age 85, both hemispheres 54.6
2045 Male, age 76, both hemispheres 50.2
2749 Male, age 80, left hemisphere 47.4
Hippocampus, CA2
nTPM: 57.9
2249 Male, age 74, both hemispheres 73.6
1940 Female, age 85, left hemisphere 63.9
2113 Female, age 91, right hemisphere 56.8
2437 Female, age 94, left hemisphere 53.7
1963 Male, age 80, left hemisphere 50.2
1892 Male, age 76, both hemispheres 49.1
Hippocampus, CA3
nTPM: 62.0
2436 Male, age 74, both hemispheres 106.3
2861 Female, age 67, both hemispheres 60.2
1891 Female, age 85, both hemispheres 55.3
2620 Female, age 94, left hemisphere 55.2
1867 Male, age 76, both hemispheres 48.3
2137 Male, age 80, left hemisphere 46.5
Parahippocampal cortex
nTPM: 52.3
2692 Male, age 74, both hemispheres 57.9
1990 Female, age 91, right hemisphere 57.4
2250 Female, age 67, right hemisphere 53.7
1933 Female, age 85, both hemispheres 52.9
2018 Male, age 76, both hemispheres 52.1
1850 Male, age 80, both hemispheres 51.6
2245 Female, age 91, both hemispheres 51.3
2622 Female, age 67, right hemisphere 50.5
2532 Female, age 72, left hemisphere 48.8
2693 Female, age 94, both hemispheres 46.7
Perirhinal gyrus
nTPM: 49.6
1847 Female, age 91, left hemisphere 56.6
1794 Male, age 80, right hemisphere 49.6
1841 Female, age 85, right hemisphere 48.4
2521 Female, age 94, right hemisphere 48.1
2848 Male, age 76, right hemisphere 45.1
Subiculum
nTPM: 55.8
1977 Female, age 85, both hemispheres 59.2
2619 Male, age 74, both hemispheres 58.2
2042 Male, age 76, both hemispheres 56.0
2729 Female, age 91, right hemisphere 55.2
2438 Female, age 94, left hemisphere 53.3
1901 Male, age 80, both hemispheres 53.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.3
Samples: 197

Max nTPM: 164.0
Min nTPM: 25.5
Std nTPM: 27.2
Median nTPM: 71.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 164.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 146.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 142.9
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 135.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 133.8
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 128.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 123.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 123.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 122.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 121.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 120.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.7
FF:10153-102I9 76 years, female 18.2
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 101.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 89.2
Samples: 4

Max nTPM: 130.9
Min nTPM: 58.5
Sample A Female 105.6
Sample B Female 61.6
Sample C Male 130.9
Sample D Male 58.5
Entorhinal cortex
nTPM: 67.3
Samples: 4

Max nTPM: 92.8
Min nTPM: 35.0
Sample A Female 78.2
Sample B Female 63.1
Sample C Male 92.8
Sample D Male 35.0
Subiculum
nTPM: 91.3
Samples: 4

Max nTPM: 105.8
Min nTPM: 68.7
Sample A Female 105.8
Sample B Female 68.7
Sample C Male 92.1
Sample D Male 98.5
Ventral hippocampus
nTPM: 101.2
Samples: 4

Max nTPM: 155.4
Min nTPM: 68.6
Sample A Female 109.5
Sample B Female 68.6
Sample C Male 155.4
Sample D Male 71.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 14.0
Sample A Male 14.0
Sample B Male 15.3
Sample C Female 20.6
Sample D Female 18.1
Hippocampal formation
nTPM: 42.0
Samples: 4

Max nTPM: 55.9
Min nTPM: 33.7
Sample A Male 36.4
Sample B Male 33.7
Sample C Female 42.1
Sample D Female 55.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
75077281 Antisense, RP_060412_02_E12, Mouse strain C57BL/6J (56 days, male) 1.6
68920749 Antisense, RP_050303_01_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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