HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:149.9 nTPM
HPA:149.9 nTPM
GTEx:172.3 nTPM
FANTOM5:119.9 Scaled Tags Per Million
Pig:178.9 nTPM
Mouse:234.4 nTPM
Allen mouse:22.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030542
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 149.9
Sample id Sample description nTPM
Hippocampus
nTPM: 140.3
1898 Male, age 80, left hemisphere 156.4
2529 Female, age 94, left hemisphere 141.6
2148 Female, age 91, left hemisphere 138.4
1855 Male, age 76, left hemisphere 137.6
2621 Female, age 67, right hemisphere 137.4
1911 Female, age 85, right hemisphere 130.4
Dentate gyrus
nTPM: 137.0
2530 Female, age 94, left hemisphere 141.9
1927 Female, age 91, both hemispheres 140.5
2010 Male, age 76, both hemispheres 139.3
2528 Male, age 74, both hemispheres 138.9
2246 Female, age 85, both hemispheres 132.3
2531 Female, age 67, both hemispheres 129.2
Entorhinal gyrus
nTPM: 143.9
2764 Male, age 80, right hemisphere 152.4
1938 Female, age 85, left hemisphere 148.6
2117 Female, age 91, right hemisphere 146.2
1787 Male, age 76, left hemisphere 141.1
2686 Male, age 75, right hemisphere 139.7
2613 Female, age 94, left hemisphere 135.3
Hippocampus, CA1
nTPM: 143.3
2749 Male, age 80, left hemisphere 169.0
1873 Female, age 85, both hemispheres 142.3
2527 Male, age 74, both hemispheres 136.1
2082 Female, age 91, right hemisphere 134.5
2045 Male, age 76, both hemispheres 134.3
Hippocampus, CA2
nTPM: 141.2
1963 Male, age 80, left hemisphere 154.3
1892 Male, age 76, both hemispheres 152.4
2249 Male, age 74, both hemispheres 139.2
1940 Female, age 85, left hemisphere 135.5
2437 Female, age 94, left hemisphere 134.2
2113 Female, age 91, right hemisphere 131.6
Hippocampus, CA3
nTPM: 141.3
2137 Male, age 80, left hemisphere 157.1
1867 Male, age 76, both hemispheres 148.0
1891 Female, age 85, both hemispheres 140.6
2620 Female, age 94, left hemisphere 137.8
2436 Male, age 74, both hemispheres 132.2
2861 Female, age 67, both hemispheres 132.2
Parahippocampal cortex
nTPM: 136.8
1850 Male, age 80, both hemispheres 155.4
1990 Female, age 91, right hemisphere 143.7
1933 Female, age 85, both hemispheres 141.5
2532 Female, age 72, left hemisphere 135.7
2018 Male, age 76, both hemispheres 134.6
2692 Male, age 74, both hemispheres 133.4
2250 Female, age 67, right hemisphere 133.1
2693 Female, age 94, both hemispheres 132.1
2245 Female, age 91, both hemispheres 130.0
2622 Female, age 67, right hemisphere 128.9
Perirhinal gyrus
nTPM: 149.9
1794 Male, age 80, right hemisphere 159.9
1847 Female, age 91, left hemisphere 153.8
1841 Female, age 85, right hemisphere 152.7
2848 Male, age 76, right hemisphere 142.4
2521 Female, age 94, right hemisphere 140.5
Subiculum
nTPM: 137.0
1901 Male, age 80, both hemispheres 148.0
1977 Female, age 85, both hemispheres 147.0
2042 Male, age 76, both hemispheres 135.8
2619 Male, age 74, both hemispheres 133.4
2729 Female, age 91, right hemisphere 131.5
2438 Female, age 94, left hemisphere 126.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 172.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 172.3
Samples: 197

Max nTPM: 228.7
Min nTPM: 109.2
Std nTPM: 20.9
Median nTPM: 172.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 228.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 224.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 218.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 217.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 217.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 217.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 216.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 216.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 203.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 203.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 203.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.9
FF:10169-103B7 60 years, female 162.1
FF:10153-102I9 76 years, female 77.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 178.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 178.9
Samples: 4

Max nTPM: 222.8
Min nTPM: 148.8
Sample A Female 222.8
Sample B Female 169.4
Sample C Male 174.7
Sample D Male 148.8
Entorhinal cortex
nTPM: 159.3
Samples: 4

Max nTPM: 174.1
Min nTPM: 142.6
Sample A Female 158.0
Sample B Female 174.1
Sample C Male 162.3
Sample D Male 142.6
Subiculum
nTPM: 158.5
Samples: 4

Max nTPM: 200.4
Min nTPM: 137.0
Sample A Female 200.4
Sample B Female 152.8
Sample C Male 143.6
Sample D Male 137.0
Ventral hippocampus
nTPM: 159.5
Samples: 4

Max nTPM: 182.3
Min nTPM: 124.9
Sample A Female 158.5
Sample B Female 124.9
Sample C Male 182.3
Sample D Male 172.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 234.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 232.1
Samples: 4

Max nTPM: 243.1
Min nTPM: 219.4
Sample A Male 232.1
Sample B Male 233.9
Sample C Female 219.4
Sample D Female 243.1
Hippocampal formation
nTPM: 234.4
Samples: 4

Max nTPM: 249.2
Min nTPM: 224.9
Sample A Male 224.9
Sample B Male 228.0
Sample C Female 249.2
Sample D Female 235.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.0
513227 Antisense, RP_040810_01_C03, Mouse strain C57BL/6J (56 days, male) 22.0

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