HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.6 nTPM
HPA:51.6 nTPM
GTEx:87.6 nTPM
FANTOM5:30.0 Scaled Tags Per Million
Pig:34.1 nTPM
Mouse:21.6 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073607Antibody CAB011538
Glial cells Not detectedMedium
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.6
Sample id Sample description nTPM
Hippocampus
nTPM: 51.6
2529 Female, age 94, left hemisphere 64.1
2621 Female, age 67, right hemisphere 63.0
1911 Female, age 85, right hemisphere 54.5
2148 Female, age 91, left hemisphere 46.9
1898 Male, age 80, left hemisphere 42.8
1855 Male, age 76, left hemisphere 38.4
Dentate gyrus
nTPM: 45.1
2531 Female, age 67, both hemispheres 60.6
1927 Female, age 91, both hemispheres 48.3
2530 Female, age 94, left hemisphere 42.9
2528 Male, age 74, both hemispheres 41.3
2246 Female, age 85, both hemispheres 39.3
2010 Male, age 76, both hemispheres 38.3
Entorhinal gyrus
nTPM: 49.3
2613 Female, age 94, left hemisphere 59.3
2686 Male, age 75, right hemisphere 49.8
2764 Male, age 80, right hemisphere 47.9
1787 Male, age 76, left hemisphere 47.4
1938 Female, age 85, left hemisphere 46.3
2117 Female, age 91, right hemisphere 45.1
Hippocampus, CA1
nTPM: 46.2
2527 Male, age 74, both hemispheres 52.2
2082 Female, age 91, right hemisphere 49.9
2749 Male, age 80, left hemisphere 49.8
1873 Female, age 85, both hemispheres 40.8
2045 Male, age 76, both hemispheres 38.3
Hippocampus, CA2
nTPM: 44.8
1963 Male, age 80, left hemisphere 53.7
2113 Female, age 91, right hemisphere 51.0
2437 Female, age 94, left hemisphere 44.9
2249 Male, age 74, both hemispheres 41.3
1892 Male, age 76, both hemispheres 40.3
1940 Female, age 85, left hemisphere 37.7
Hippocampus, CA3
nTPM: 48.6
2861 Female, age 67, both hemispheres 63.0
2137 Male, age 80, left hemisphere 55.2
2620 Female, age 94, left hemisphere 55.0
1867 Male, age 76, both hemispheres 40.3
1891 Female, age 85, both hemispheres 39.5
2436 Male, age 74, both hemispheres 38.7
Parahippocampal cortex
nTPM: 46.2
2245 Female, age 91, both hemispheres 55.5
2622 Female, age 67, right hemisphere 54.8
2018 Male, age 76, both hemispheres 48.8
2250 Female, age 67, right hemisphere 47.5
1933 Female, age 85, both hemispheres 44.8
2692 Male, age 74, both hemispheres 44.1
2693 Female, age 94, both hemispheres 43.7
2532 Female, age 72, left hemisphere 43.6
1990 Female, age 91, right hemisphere 40.4
1850 Male, age 80, both hemispheres 38.9
Perirhinal gyrus
nTPM: 45.0
2521 Female, age 94, right hemisphere 48.6
1847 Female, age 91, left hemisphere 47.6
1794 Male, age 80, right hemisphere 45.5
2848 Male, age 76, right hemisphere 43.2
1841 Female, age 85, right hemisphere 40.2
Subiculum
nTPM: 40.1
2619 Male, age 74, both hemispheres 42.3
1977 Female, age 85, both hemispheres 41.9
2042 Male, age 76, both hemispheres 41.6
1901 Male, age 80, both hemispheres 41.2
2729 Female, age 91, right hemisphere 41.0
2438 Female, age 94, left hemisphere 32.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.6
Samples: 197

Max nTPM: 319.2
Min nTPM: 32.1
Std nTPM: 36.5
Median nTPM: 79.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 319.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 261.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 198.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 181.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 178.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 176.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 166.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 166.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 156.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 153.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 147.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.0
FF:10153-102I9 76 years, female 31.8
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 31.1
Min nTPM: 21.7
Sample A Female 31.1
Sample B Female 28.4
Sample C Male 25.6
Sample D Male 21.7
Entorhinal cortex
nTPM: 34.1
Samples: 4

Max nTPM: 41.2
Min nTPM: 29.0
Sample A Female 34.4
Sample B Female 31.7
Sample C Male 41.2
Sample D Male 29.0
Subiculum
nTPM: 29.3
Samples: 4

Max nTPM: 37.2
Min nTPM: 23.8
Sample A Female 37.2
Sample B Female 27.7
Sample C Male 28.4
Sample D Male 23.8
Ventral hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 36.1
Min nTPM: 24.8
Sample A Female 24.8
Sample B Female 25.5
Sample C Male 36.1
Sample D Male 30.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 25.1
Min nTPM: 18.7
Sample A Male 22.1
Sample B Male 25.1
Sample C Female 20.5
Sample D Female 18.7
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 22.9
Min nTPM: 15.7
Sample A Male 22.9
Sample B Male 19.9
Sample C Female 15.7
Sample D Female 21.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
69671666 Antisense, RP_050428_02_A08, Mouse strain C57BL/6J (56 days, male) 7.9

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