HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:80.9 nTPM
HPA:80.9 nTPM
GTEx:90.3 nTPM
FANTOM5:27.8 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:21.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043496
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.9
Sample id Sample description nTPM
Hippocampus
nTPM: 79.8
2529 Female, age 94, left hemisphere 82.4
2148 Female, age 91, left hemisphere 80.2
1898 Male, age 80, left hemisphere 79.7
1911 Female, age 85, right hemisphere 79.1
2621 Female, age 67, right hemisphere 79.1
1855 Male, age 76, left hemisphere 78.5
Dentate gyrus
nTPM: 80.9
2530 Female, age 94, left hemisphere 91.9
2531 Female, age 67, both hemispheres 81.5
2010 Male, age 76, both hemispheres 80.8
2528 Male, age 74, both hemispheres 79.0
2246 Female, age 85, both hemispheres 76.4
1927 Female, age 91, both hemispheres 75.8
Entorhinal gyrus
nTPM: 80.0
2686 Male, age 75, right hemisphere 85.5
2117 Female, age 91, right hemisphere 83.2
2764 Male, age 80, right hemisphere 79.8
1787 Male, age 76, left hemisphere 77.7
2613 Female, age 94, left hemisphere 77.2
1938 Female, age 85, left hemisphere 76.8
Hippocampus, CA1
nTPM: 77.0
2082 Female, age 91, right hemisphere 78.8
1873 Female, age 85, both hemispheres 78.6
2749 Male, age 80, left hemisphere 76.6
2527 Male, age 74, both hemispheres 76.3
2045 Male, age 76, both hemispheres 74.8
Hippocampus, CA2
nTPM: 78.5
1963 Male, age 80, left hemisphere 83.5
2437 Female, age 94, left hemisphere 79.4
2113 Female, age 91, right hemisphere 78.5
1940 Female, age 85, left hemisphere 76.9
1892 Male, age 76, both hemispheres 76.6
2249 Male, age 74, both hemispheres 76.3
Hippocampus, CA3
nTPM: 77.0
2861 Female, age 67, both hemispheres 83.0
1891 Female, age 85, both hemispheres 78.8
2620 Female, age 94, left hemisphere 76.7
1867 Male, age 76, both hemispheres 76.4
2137 Male, age 80, left hemisphere 76.0
2436 Male, age 74, both hemispheres 70.9
Parahippocampal cortex
nTPM: 75.7
2692 Male, age 74, both hemispheres 78.4
2018 Male, age 76, both hemispheres 77.9
2245 Female, age 91, both hemispheres 77.3
2532 Female, age 72, left hemisphere 77.1
2622 Female, age 67, right hemisphere 77.0
1990 Female, age 91, right hemisphere 76.9
1933 Female, age 85, both hemispheres 74.7
1850 Male, age 80, both hemispheres 73.4
2250 Female, age 67, right hemisphere 72.9
2693 Female, age 94, both hemispheres 71.7
Perirhinal gyrus
nTPM: 73.6
1847 Female, age 91, left hemisphere 74.3
2848 Male, age 76, right hemisphere 74.1
1794 Male, age 80, right hemisphere 73.7
1841 Female, age 85, right hemisphere 73.3
2521 Female, age 94, right hemisphere 72.6
Subiculum
nTPM: 78.6
2042 Male, age 76, both hemispheres 79.8
2729 Female, age 91, right hemisphere 79.7
1977 Female, age 85, both hemispheres 79.4
1901 Male, age 80, both hemispheres 79.3
2438 Female, age 94, left hemisphere 77.8
2619 Male, age 74, both hemispheres 75.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.3
Samples: 197

Max nTPM: 295.4
Min nTPM: 28.6
Std nTPM: 40.9
Median nTPM: 79.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 295.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 268.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 212.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 210.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 197.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 195.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 190.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 190.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 178.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 172.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 171.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.8
FF:10153-102I9 76 years, female 31.6
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.4
Sample A Female 15.0
Sample B Female 11.8
Sample C Male 15.0
Sample D Male 10.4
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.1
Sample A Female 11.4
Sample B Female 13.5
Sample C Male 14.5
Sample D Male 10.1
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.6
Sample A Female 14.0
Sample B Female 11.4
Sample C Male 11.0
Sample D Male 9.6
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.4
Sample A Female 10.4
Sample B Female 10.5
Sample C Male 14.1
Sample D Male 11.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 21.3
Min nTPM: 19.3
Sample A Male 19.6
Sample B Male 19.3
Sample C Female 21.3
Sample D Female 19.7
Hippocampal formation
nTPM: 21.1
Samples: 4

Max nTPM: 23.6
Min nTPM: 15.2
Sample A Male 15.2
Sample B Male 22.5
Sample C Female 23.6
Sample D Female 22.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68441616 Antisense, RP_041214_02_F11, Mouse strain C57BL/6J (56 days, male) 0.6

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