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RPL28
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:886.6 nTPM
HPA:886.6 nTPM
GTEx:1321.2 nTPM
FANTOM5:355.1 Scaled Tags Per Million
Pig:87.8 nTPM
Mouse:209.8 nTPM
Allen mouse:9.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 886.6
Sample id Sample description nTPM
Amygdala
nTPM: 883.1
2695 Female, age 67, right hemisphere 935.8
2514 Male, age 75, right hemisphere 895.3
2517 Female, age 94, left hemisphere 890.9
2814 Male, age 76, right hemisphere 855.8
1987 Female, age 91, left hemisphere 837.6
Basal amygdala
nTPM: 863.2
2827 Female, age 67, right hemisphere 925.6
2609 Male, age 75, right hemisphere 885.7
2685 Female, age 94, left hemisphere 852.1
2243 Female, age 91, right hemisphere 849.7
1955 Male, age 76, both hemispheres 833.4
2110 Male, age 80, left hemisphere 833.0
Central amygdala
nTPM: 872.6
2826 Female, age 94, left hemisphere 967.4
2515 Male, age 75, right hemisphere 891.6
2239 Male, age 80, left hemisphere 851.7
2701 Female, age 91, right hemisphere 832.8
1905 Male, age 76, both hemispheres 819.6
Corticomedial amygdala
nTPM: 858.4
2535 Female, age 67, right hemisphere 904.6
2428 Male, age 75, right hemisphere 890.9
2242 Female, age 91, right hemisphere 861.2
2429 Female, age 94, left hemisphere 848.2
2829 Male, age 80, left hemisphere 839.6
2240 Male, age 76, both hemispheres 806.0
Lateral amygdala
nTPM: 886.6
2830 Female, age 67, right hemisphere 951.3
2516 Male, age 75, right hemisphere 918.5
2534 Female, age 94, left hemisphere 917.9
2256 Male, age 80, left hemisphere 874.4
2255 Female, age 91, right hemisphere 843.2
1883 Male, age 76, both hemispheres 814.4
Stria terminalis, bed nucleus
nTPM: 815.6
2201 Male, age 74, unknown 827.1
1974 Female, age 91, both hemispheres 825.6
2486 Female, age 94, both hemispheres 794.1

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1321.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1321.2
Samples: 152

Max nTPM: 3445.9
Min nTPM: 615.1
Std nTPM: 533.9
Median nTPM: 1187.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3445.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 3413.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 3062.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2811.4
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 2777.7
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2398.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2333.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2332.7
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 2331.7
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2293.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 2251.2
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 2235.0
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2219.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2158.7
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 2130.5
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 2025.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1934.8
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1906.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1876.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1870.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1865.9
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1811.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1809.1
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1808.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1797.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1784.3
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1778.6
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1735.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1719.8
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1686.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1684.7
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1673.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1655.1
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1636.9
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1630.5
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1567.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1548.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1542.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1539.2
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1527.7
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1506.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1503.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1490.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1482.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1462.9
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1450.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1446.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1418.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1409.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1399.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1361.6
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1348.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1346.7
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1343.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1341.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1331.4
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1326.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1318.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1310.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1296.5
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1294.7
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1282.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1267.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1261.2
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1258.5
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1247.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1246.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1239.4
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1221.4
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1217.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1214.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1212.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 1210.6
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1202.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1194.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1189.0
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1186.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1184.9
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1182.8
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1182.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1181.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1179.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1174.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1165.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1163.9
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1161.5
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1133.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1132.7
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1129.1
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1114.2
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1114.0
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1109.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1090.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1090.2
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1087.9
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1086.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1082.0
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1074.5
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1071.5
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1071.4
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1070.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 1044.7
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1043.9
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1041.5
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1028.1
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1009.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 995.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 994.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 993.5
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 989.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 980.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 940.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 924.8
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 923.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 915.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 911.4
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 910.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 901.7
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 899.5
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 893.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 883.7
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 882.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 861.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 856.3
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 853.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 851.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 844.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 842.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 834.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 834.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 817.5
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 815.2
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 800.7
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 796.3
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 795.7
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 795.2
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 794.8
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 793.1
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 782.1
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 773.3
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 772.6
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 770.9
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 770.7
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 752.0
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 727.3
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 722.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 702.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 684.8
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 677.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 655.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 630.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 615.1
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 355.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 355.1
FF:10151-102I7 76 years, female 355.1

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 87.8
Pig sample Sample description nTPM
Amygdala
nTPM: 87.8
Samples: 4

Max nTPM: 123.1
Min nTPM: 57.6
Sample A Female 123.1
Sample B Female 83.2
Sample C Male 87.4
Sample D Male 57.6

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 209.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 209.8
Samples: 4

Max nTPM: 236.8
Min nTPM: 194.6
Sample A Male 208.6
Sample B Male 194.6
Sample C Female 236.8
Sample D Female 199.1

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.8
69173436 Antisense, RP_050329_01_E12, Mouse strain C57BL/6J (56 days, male) 9.8

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