We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL28
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • RPL28
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:885.2 nTPM
FANTOM5:420.2 Scaled Tags Per Million
Pig:92.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA050459
Glial cells Not detected
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 885.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 885.2
Samples: 246

Max nTPM: 3039.2
Min nTPM: 300.7
Std nTPM: 308.9
Median nTPM: 837.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3039.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2113.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1860.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1752.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1594.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1541.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1517.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1448.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1446.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1398.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1384.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1383.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1375.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1366.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1360.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1356.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1332.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1328.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1312.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1301.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1287.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1274.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1272.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1249.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1242.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1236.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1234.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1228.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1225.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1219.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1209.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1202.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1198.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1194.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1194.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1188.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1186.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1185.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1176.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1175.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1169.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1164.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1160.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1157.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1148.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1143.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1139.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1126.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1119.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1116.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1115.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1107.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1106.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1084.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1081.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1075.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1074.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1073.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1068.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1060.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1058.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1035.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1032.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1027.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1024.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1024.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1018.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1017.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1002.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 991.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 986.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 982.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 981.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 979.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 976.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 968.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 954.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 950.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 948.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 947.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 945.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 943.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 942.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 939.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 936.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 925.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 915.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 915.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 915.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 914.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 913.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 908.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 907.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 906.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 906.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 905.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 902.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 899.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 895.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 888.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 884.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 884.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 882.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 882.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 874.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 873.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 872.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 871.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 869.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 867.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 863.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 863.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 862.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 862.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 855.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 854.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 850.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 848.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 846.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 843.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 841.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 840.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 838.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 836.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 834.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 830.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 829.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 828.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 821.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 821.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 817.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 813.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 809.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 805.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 802.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 801.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 801.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 799.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 798.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 796.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 795.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 792.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 784.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 783.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 776.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 775.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 771.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 770.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 770.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 767.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 767.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 764.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 763.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 757.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 757.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 753.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 751.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 749.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 746.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 744.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 744.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 741.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 741.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 728.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 722.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 720.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 719.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 719.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 717.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 714.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 714.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 713.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 709.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 704.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 703.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 701.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 694.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 694.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 692.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 691.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 691.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 690.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 688.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 676.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 673.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 672.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 671.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 670.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 668.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 667.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 662.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 657.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 657.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 657.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 656.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 646.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 644.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 644.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 643.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 642.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 641.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 636.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 636.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 634.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 630.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 625.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 625.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 624.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 618.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 615.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 615.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 614.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 607.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 603.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 592.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 590.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 589.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 589.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 584.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 582.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 576.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 571.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 558.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 550.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 540.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 538.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 537.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 532.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 527.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 525.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 525.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 523.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 520.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 518.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 510.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 503.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 493.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 492.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 489.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 477.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 428.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 412.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 401.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 391.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 327.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 300.7
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 420.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 420.2
FF:10164-103B2 76 years, female 420.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 92.9
Pig sample Sample description nTPM
Caudate
nTPM: 92.9
Samples: 4

Max nTPM: 107.5
Min nTPM: 73.9
Sample A Female 84.6
Sample B Female 107.5
Sample C Male 105.7
Sample D Male 73.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.