HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:77.0 nTPM
HPA:77.0 nTPM
GTEx:56.2 nTPM
FANTOM5:94.3 Scaled Tags Per Million
Pig:24.8 nTPM
Mouse:26.3 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024592
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.0
Sample id Sample description nTPM
Hippocampus
nTPM: 75.1
2529 Female, age 94, left hemisphere 76.7
2621 Female, age 67, right hemisphere 76.7
1898 Male, age 80, left hemisphere 75.5
2148 Female, age 91, left hemisphere 75.2
1855 Male, age 76, left hemisphere 73.8
1911 Female, age 85, right hemisphere 73.0
Dentate gyrus
nTPM: 75.4
2530 Female, age 94, left hemisphere 86.9
2010 Male, age 76, both hemispheres 79.3
2531 Female, age 67, both hemispheres 73.7
2246 Female, age 85, both hemispheres 72.8
2528 Male, age 74, both hemispheres 71.2
1927 Female, age 91, both hemispheres 68.8
Entorhinal gyrus
nTPM: 76.5
2686 Male, age 75, right hemisphere 86.4
2117 Female, age 91, right hemisphere 81.1
2764 Male, age 80, right hemisphere 73.8
2613 Female, age 94, left hemisphere 72.9
1787 Male, age 76, left hemisphere 72.2
1938 Female, age 85, left hemisphere 72.2
Hippocampus, CA1
nTPM: 71.2
1873 Female, age 85, both hemispheres 75.3
2045 Male, age 76, both hemispheres 70.8
2082 Female, age 91, right hemisphere 70.8
2527 Male, age 74, both hemispheres 70.8
2749 Male, age 80, left hemisphere 68.4
Hippocampus, CA2
nTPM: 73.6
1963 Male, age 80, left hemisphere 77.8
2437 Female, age 94, left hemisphere 74.2
1892 Male, age 76, both hemispheres 74.1
2113 Female, age 91, right hemisphere 73.7
1940 Female, age 85, left hemisphere 72.1
2249 Male, age 74, both hemispheres 69.6
Hippocampus, CA3
nTPM: 70.7
1891 Female, age 85, both hemispheres 76.5
2861 Female, age 67, both hemispheres 75.4
1867 Male, age 76, both hemispheres 72.8
2137 Male, age 80, left hemisphere 68.8
2620 Female, age 94, left hemisphere 68.0
2436 Male, age 74, both hemispheres 63.1
Parahippocampal cortex
nTPM: 72.6
2692 Male, age 74, both hemispheres 79.7
2532 Female, age 72, left hemisphere 75.3
2018 Male, age 76, both hemispheres 74.8
2622 Female, age 67, right hemisphere 74.3
2245 Female, age 91, both hemispheres 73.1
1850 Male, age 80, both hemispheres 72.7
1990 Female, age 91, right hemisphere 71.3
1933 Female, age 85, both hemispheres 70.5
2250 Female, age 67, right hemisphere 67.3
2693 Female, age 94, both hemispheres 67.2
Perirhinal gyrus
nTPM: 68.9
2848 Male, age 76, right hemisphere 73.8
1794 Male, age 80, right hemisphere 69.2
1841 Female, age 85, right hemisphere 69.2
1847 Female, age 91, left hemisphere 68.7
2521 Female, age 94, right hemisphere 63.6
Subiculum
nTPM: 77.0
2438 Female, age 94, left hemisphere 86.0
2042 Male, age 76, both hemispheres 80.2
1901 Male, age 80, both hemispheres 75.2
2729 Female, age 91, right hemisphere 74.2
1977 Female, age 85, both hemispheres 73.3
2619 Male, age 74, both hemispheres 72.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.2
Samples: 197

Max nTPM: 172.2
Min nTPM: 13.9
Std nTPM: 25.9
Median nTPM: 49.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 172.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 163.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 162.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 139.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 122.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 115.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 114.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 110.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 108.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 102.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 101.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.3
FF:10153-102I9 76 years, female 94.5
FF:10169-103B7 60 years, female 94.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 28.4
Min nTPM: 21.1
Sample A Female 28.4
Sample B Female 24.5
Sample C Male 25.3
Sample D Male 21.1
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 19.4
Sample A Female 23.6
Sample B Female 19.6
Sample C Male 19.6
Sample D Male 19.4
Subiculum
nTPM: 22.8
Samples: 4

Max nTPM: 26.7
Min nTPM: 20.8
Sample A Female 26.7
Sample B Female 21.7
Sample C Male 21.8
Sample D Male 20.8
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 29.2
Min nTPM: 18.9
Sample A Female 22.5
Sample B Female 18.9
Sample C Male 29.2
Sample D Male 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 26.8
Min nTPM: 24.9
Sample A Male 25.8
Sample B Male 24.9
Sample C Female 26.4
Sample D Female 26.8
Hippocampal formation
nTPM: 26.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 24.7
Sample A Male 25.3
Sample B Male 28.5
Sample C Female 26.8
Sample D Female 24.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69540387 Antisense, RP_050426_01_F09, Mouse strain C57BL/6J (56 days, male) 1.1

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