HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:76.8 nTPM
HPA:76.8 nTPM
GTEx:58.6 nTPM
FANTOM5:40.6 Scaled Tags Per Million
Pig:10.3 nTPM
Mouse:136.2 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021167
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.8
Sample id Sample description nTPM
Hippocampus
nTPM: 70.0
1898 Male, age 80, left hemisphere 77.1
1855 Male, age 76, left hemisphere 72.4
2148 Female, age 91, left hemisphere 70.0
2621 Female, age 67, right hemisphere 67.8
1911 Female, age 85, right hemisphere 66.5
2529 Female, age 94, left hemisphere 66.2
Dentate gyrus
nTPM: 70.6
2530 Female, age 94, left hemisphere 75.1
2010 Male, age 76, both hemispheres 73.9
1927 Female, age 91, both hemispheres 73.8
2528 Male, age 74, both hemispheres 70.1
2246 Female, age 85, both hemispheres 68.7
2531 Female, age 67, both hemispheres 61.9
Entorhinal gyrus
nTPM: 68.3
2764 Male, age 80, right hemisphere 74.5
2613 Female, age 94, left hemisphere 71.3
1938 Female, age 85, left hemisphere 69.9
2117 Female, age 91, right hemisphere 67.0
1787 Male, age 76, left hemisphere 66.8
2686 Male, age 75, right hemisphere 60.5
Hippocampus, CA1
nTPM: 76.8
2749 Male, age 80, left hemisphere 103.4
1873 Female, age 85, both hemispheres 75.4
2527 Male, age 74, both hemispheres 70.0
2045 Male, age 76, both hemispheres 69.4
2082 Female, age 91, right hemisphere 65.8
Hippocampus, CA2
nTPM: 73.2
1963 Male, age 80, left hemisphere 84.6
1892 Male, age 76, both hemispheres 83.7
2249 Male, age 74, both hemispheres 71.9
2437 Female, age 94, left hemisphere 70.4
2113 Female, age 91, right hemisphere 65.1
1940 Female, age 85, left hemisphere 63.7
Hippocampus, CA3
nTPM: 71.8
2137 Male, age 80, left hemisphere 88.4
1867 Male, age 76, both hemispheres 73.4
2436 Male, age 74, both hemispheres 73.1
1891 Female, age 85, both hemispheres 65.6
2620 Female, age 94, left hemisphere 65.4
2861 Female, age 67, both hemispheres 64.7
Parahippocampal cortex
nTPM: 66.5
1850 Male, age 80, both hemispheres 70.8
1933 Female, age 85, both hemispheres 69.4
2245 Female, age 91, both hemispheres 68.8
1990 Female, age 91, right hemisphere 68.2
2250 Female, age 67, right hemisphere 67.3
2692 Male, age 74, both hemispheres 65.9
2018 Male, age 76, both hemispheres 65.2
2693 Female, age 94, both hemispheres 64.0
2532 Female, age 72, left hemisphere 63.6
2622 Female, age 67, right hemisphere 62.4
Perirhinal gyrus
nTPM: 71.1
1847 Female, age 91, left hemisphere 77.7
1794 Male, age 80, right hemisphere 75.6
1841 Female, age 85, right hemisphere 69.6
2848 Male, age 76, right hemisphere 66.5
2521 Female, age 94, right hemisphere 66.2
Subiculum
nTPM: 67.2
1901 Male, age 80, both hemispheres 71.8
1977 Female, age 85, both hemispheres 71.2
2438 Female, age 94, left hemisphere 66.3
2619 Male, age 74, both hemispheres 65.2
2042 Male, age 76, both hemispheres 64.9
2729 Female, age 91, right hemisphere 64.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.6
Samples: 197

Max nTPM: 118.0
Min nTPM: 24.3
Std nTPM: 19.2
Median nTPM: 55.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 118.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 112.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 112.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 110.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 110.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 109.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 106.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 104.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 103.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 99.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 99.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.6
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 12.4
Min nTPM: 7.9
Sample A Female 12.4
Sample B Female 11.0
Sample C Male 8.7
Sample D Male 7.9
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 11.0
Min nTPM: 7.2
Sample A Female 9.2
Sample B Female 11.0
Sample C Male 9.7
Sample D Male 7.2
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.8
Sample A Female 11.1
Sample B Female 8.5
Sample C Male 8.7
Sample D Male 7.8
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 13.3
Min nTPM: 7.0
Sample A Female 11.5
Sample B Female 7.0
Sample C Male 13.3
Sample D Male 9.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 136.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.0
Samples: 4

Max nTPM: 140.1
Min nTPM: 126.1
Sample A Male 126.1
Sample B Male 129.8
Sample C Female 140.1
Sample D Female 136.0
Hippocampal formation
nTPM: 136.2
Samples: 4

Max nTPM: 149.6
Min nTPM: 125.2
Sample A Male 149.6
Sample B Male 125.2
Sample C Female 140.2
Sample D Female 129.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
81599614 Antisense, RP_071126_03_C09, Mouse strain C57BL/6J (56 days, male) 7.6

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