HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.8 nTPM
HPA:60.8 nTPM
GTEx:58.6 nTPM
FANTOM5:179.3 Scaled Tags Per Million
Pig:3.9 nTPM
Mouse:54.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047896
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.8
Sample id Sample description nTPM
Hippocampus
nTPM: 39.7
1898 Male, age 80, left hemisphere 49.1
1855 Male, age 76, left hemisphere 43.6
1911 Female, age 85, right hemisphere 38.5
2621 Female, age 67, right hemisphere 38.0
2529 Female, age 94, left hemisphere 37.5
2148 Female, age 91, left hemisphere 31.3
Dentate gyrus
nTPM: 37.6
2246 Female, age 85, both hemispheres 43.7
2530 Female, age 94, left hemisphere 39.4
2528 Male, age 74, both hemispheres 38.6
2531 Female, age 67, both hemispheres 38.2
1927 Female, age 91, both hemispheres 34.5
2010 Male, age 76, both hemispheres 31.4
Entorhinal gyrus
nTPM: 57.0
2764 Male, age 80, right hemisphere 82.1
2686 Male, age 75, right hemisphere 59.8
1938 Female, age 85, left hemisphere 58.0
2613 Female, age 94, left hemisphere 57.9
2117 Female, age 91, right hemisphere 44.2
1787 Male, age 76, left hemisphere 40.0
Hippocampus, CA1
nTPM: 41.0
2749 Male, age 80, left hemisphere 47.3
2527 Male, age 74, both hemispheres 43.0
2082 Female, age 91, right hemisphere 42.3
1873 Female, age 85, both hemispheres 39.2
2045 Male, age 76, both hemispheres 33.1
Hippocampus, CA2
nTPM: 43.9
1940 Female, age 85, left hemisphere 59.7
2249 Male, age 74, both hemispheres 54.3
2437 Female, age 94, left hemisphere 48.2
2113 Female, age 91, right hemisphere 39.7
1963 Male, age 80, left hemisphere 32.6
1892 Male, age 76, both hemispheres 29.0
Hippocampus, CA3
nTPM: 38.3
2620 Female, age 94, left hemisphere 56.1
2137 Male, age 80, left hemisphere 38.4
2861 Female, age 67, both hemispheres 37.0
2436 Male, age 74, both hemispheres 34.3
1891 Female, age 85, both hemispheres 32.5
1867 Male, age 76, both hemispheres 31.5
Parahippocampal cortex
nTPM: 54.8
2532 Female, age 72, left hemisphere 72.5
1850 Male, age 80, both hemispheres 69.4
2245 Female, age 91, both hemispheres 65.0
1933 Female, age 85, both hemispheres 64.5
2622 Female, age 67, right hemisphere 59.7
2693 Female, age 94, both hemispheres 59.3
1990 Female, age 91, right hemisphere 47.0
2250 Female, age 67, right hemisphere 45.0
2692 Male, age 74, both hemispheres 38.9
2018 Male, age 76, both hemispheres 27.0
Perirhinal gyrus
nTPM: 60.8
1794 Male, age 80, right hemisphere 87.6
1841 Female, age 85, right hemisphere 81.1
1847 Female, age 91, left hemisphere 54.6
2521 Female, age 94, right hemisphere 42.4
2848 Male, age 76, right hemisphere 38.3
Subiculum
nTPM: 40.8
1977 Female, age 85, both hemispheres 56.1
2438 Female, age 94, left hemisphere 47.4
2619 Male, age 74, both hemispheres 40.9
1901 Male, age 80, both hemispheres 39.0
2042 Male, age 76, both hemispheres 31.1
2729 Female, age 91, right hemisphere 30.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.6
Samples: 197

Max nTPM: 225.1
Min nTPM: 13.6
Std nTPM: 32.3
Median nTPM: 52.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 225.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 199.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 182.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 177.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 151.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 133.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 132.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 125.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 117.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 111.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 111.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 179.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 179.3
FF:10169-103B7 60 years, female 231.2
FF:10153-102I9 76 years, female 127.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.3
Sample A Female 4.2
Sample B Female 3.4
Sample C Male 2.3
Sample D Male 3.2
Entorhinal cortex
nTPM: 3.6
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.0
Sample A Female 3.1
Sample B Female 3.0
Sample C Male 4.8
Sample D Male 3.5
Subiculum
nTPM: 3.1
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.2
Sample A Female 3.3
Sample B Female 2.2
Sample C Male 3.5
Sample D Male 3.2
Ventral hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.3
Sample A Female 4.1
Sample B Female 3.2
Sample C Male 6.2
Sample D Male 2.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 18.9
Min nTPM: 5.6
Sample A Male 13.7
Sample B Male 5.6
Sample C Female 18.9
Sample D Female 7.1
Hippocampal formation
nTPM: 54.9
Samples: 4

Max nTPM: 68.5
Min nTPM: 45.8
Sample A Male 45.8
Sample B Male 53.9
Sample C Female 68.5
Sample D Female 51.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
2521 Antisense, RP_Baylor_102997, Mouse strain C57BL/6J (56 days, male) 0.2
2522 Antisense, RP_Baylor_102997, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.