HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:69.0 nTPM
HPA:69.0 nTPM
GTEx:63.1 nTPM
FANTOM5:95.7 Scaled Tags Per Million
Pig:75.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.0
Sample id Sample description nTPM
Hippocampus
nTPM: 63.9
1898 Male, age 80, left hemisphere 72.4
2621 Female, age 67, right hemisphere 67.0
1855 Male, age 76, left hemisphere 63.3
2148 Female, age 91, left hemisphere 62.4
2529 Female, age 94, left hemisphere 60.3
1911 Female, age 85, right hemisphere 58.2
Dentate gyrus
nTPM: 64.4
1927 Female, age 91, both hemispheres 69.2
2530 Female, age 94, left hemisphere 66.0
2010 Male, age 76, both hemispheres 64.6
2528 Male, age 74, both hemispheres 62.6
2246 Female, age 85, both hemispheres 62.0
2531 Female, age 67, both hemispheres 61.8
Entorhinal gyrus
nTPM: 63.9
2764 Male, age 80, right hemisphere 69.6
2613 Female, age 94, left hemisphere 66.8
1938 Female, age 85, left hemisphere 66.1
1787 Male, age 76, left hemisphere 65.0
2686 Male, age 75, right hemisphere 59.0
2117 Female, age 91, right hemisphere 56.7
Hippocampus, CA1
nTPM: 65.3
2749 Male, age 80, left hemisphere 83.9
1873 Female, age 85, both hemispheres 65.4
2527 Male, age 74, both hemispheres 63.8
2082 Female, age 91, right hemisphere 57.0
2045 Male, age 76, both hemispheres 56.2
Hippocampus, CA2
nTPM: 65.7
1963 Male, age 80, left hemisphere 77.0
1892 Male, age 76, both hemispheres 71.4
2437 Female, age 94, left hemisphere 65.6
1940 Female, age 85, left hemisphere 62.6
2249 Male, age 74, both hemispheres 60.9
2113 Female, age 91, right hemisphere 56.9
Hippocampus, CA3
nTPM: 67.3
2137 Male, age 80, left hemisphere 77.0
2861 Female, age 67, both hemispheres 68.2
2436 Male, age 74, both hemispheres 66.2
2620 Female, age 94, left hemisphere 66.1
1867 Male, age 76, both hemispheres 65.3
1891 Female, age 85, both hemispheres 60.8
Parahippocampal cortex
nTPM: 65.0
1850 Male, age 80, both hemispheres 73.1
2532 Female, age 72, left hemisphere 67.2
1933 Female, age 85, both hemispheres 66.7
1990 Female, age 91, right hemisphere 65.3
2245 Female, age 91, both hemispheres 65.1
2250 Female, age 67, right hemisphere 65.1
2622 Female, age 67, right hemisphere 63.7
2692 Male, age 74, both hemispheres 63.6
2693 Female, age 94, both hemispheres 61.9
2018 Male, age 76, both hemispheres 58.5
Perirhinal gyrus
nTPM: 69.0
1847 Female, age 91, left hemisphere 75.6
1794 Male, age 80, right hemisphere 72.0
1841 Female, age 85, right hemisphere 68.4
2521 Female, age 94, right hemisphere 67.2
2848 Male, age 76, right hemisphere 61.6
Subiculum
nTPM: 62.0
1901 Male, age 80, both hemispheres 65.8
1977 Female, age 85, both hemispheres 64.3
2438 Female, age 94, left hemisphere 62.9
2619 Male, age 74, both hemispheres 61.9
2042 Male, age 76, both hemispheres 59.8
2729 Female, age 91, right hemisphere 57.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.1
Samples: 197

Max nTPM: 123.2
Min nTPM: 27.1
Std nTPM: 20.6
Median nTPM: 60.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 123.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 113.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 112.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 111.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 110.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 106.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 104.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 104.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 102.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 102.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 98.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.7
FF:10169-103B7 60 years, female 118.2
FF:10153-102I9 76 years, female 73.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.8
Samples: 4

Max nTPM: 109.4
Min nTPM: 58.7
Sample A Female 109.4
Sample B Female 74.4
Sample C Male 60.5
Sample D Male 58.7
Entorhinal cortex
nTPM: 74.5
Samples: 4

Max nTPM: 80.8
Min nTPM: 61.4
Sample A Female 79.5
Sample B Female 80.8
Sample C Male 76.2
Sample D Male 61.4
Subiculum
nTPM: 47.8
Samples: 4

Max nTPM: 68.7
Min nTPM: 38.6
Sample A Female 68.7
Sample B Female 44.4
Sample C Male 39.3
Sample D Male 38.6
Ventral hippocampus
nTPM: 63.0
Samples: 4

Max nTPM: 71.4
Min nTPM: 40.1
Sample A Female 71.4
Sample B Female 40.1
Sample C Male 69.3
Sample D Male 71.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.