HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:89.0 nTPM
HPA:89.0 nTPM
GTEx:92.1 nTPM
FANTOM5:263.6 Scaled Tags Per Million
Pig:172.0 nTPM
Mouse:446.0 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049979Antibody CAB019378
Glial cells Not detectedNot detected
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.0
Sample id Sample description nTPM
Hippocampus
nTPM: 60.9
2621 Female, age 67, right hemisphere 81.9
1855 Male, age 76, left hemisphere 66.1
1898 Male, age 80, left hemisphere 64.5
2529 Female, age 94, left hemisphere 53.2
1911 Female, age 85, right hemisphere 50.0
2148 Female, age 91, left hemisphere 49.6
Dentate gyrus
nTPM: 58.1
2246 Female, age 85, both hemispheres 67.8
1927 Female, age 91, both hemispheres 60.4
2010 Male, age 76, both hemispheres 60.4
2530 Female, age 94, left hemisphere 59.6
2531 Female, age 67, both hemispheres 54.4
2528 Male, age 74, both hemispheres 46.2
Entorhinal gyrus
nTPM: 66.9
1938 Female, age 85, left hemisphere 79.1
2764 Male, age 80, right hemisphere 75.0
2686 Male, age 75, right hemisphere 67.6
2613 Female, age 94, left hemisphere 65.4
1787 Male, age 76, left hemisphere 64.7
2117 Female, age 91, right hemisphere 49.8
Hippocampus, CA1
nTPM: 69.7
2749 Male, age 80, left hemisphere 99.3
2045 Male, age 76, both hemispheres 82.7
1873 Female, age 85, both hemispheres 64.6
2527 Male, age 74, both hemispheres 56.8
2082 Female, age 91, right hemisphere 45.2
Hippocampus, CA2
nTPM: 61.0
1892 Male, age 76, both hemispheres 86.3
1940 Female, age 85, left hemisphere 61.4
1963 Male, age 80, left hemisphere 59.5
2437 Female, age 94, left hemisphere 56.2
2249 Male, age 74, both hemispheres 55.5
2113 Female, age 91, right hemisphere 47.2
Hippocampus, CA3
nTPM: 67.2
2137 Male, age 80, left hemisphere 94.1
2436 Male, age 74, both hemispheres 74.4
1867 Male, age 76, both hemispheres 73.8
1891 Female, age 85, both hemispheres 60.8
2620 Female, age 94, left hemisphere 54.1
2861 Female, age 67, both hemispheres 46.0
Parahippocampal cortex
nTPM: 68.7
1850 Male, age 80, both hemispheres 92.4
2245 Female, age 91, both hemispheres 81.3
2532 Female, age 72, left hemisphere 78.6
1933 Female, age 85, both hemispheres 68.6
1990 Female, age 91, right hemisphere 67.1
2693 Female, age 94, both hemispheres 65.7
2622 Female, age 67, right hemisphere 61.6
2692 Male, age 74, both hemispheres 58.5
2250 Female, age 67, right hemisphere 58.2
2018 Male, age 76, both hemispheres 54.5
Perirhinal gyrus
nTPM: 89.0
2521 Female, age 94, right hemisphere 99.8
1847 Female, age 91, left hemisphere 92.0
1794 Male, age 80, right hemisphere 88.0
1841 Female, age 85, right hemisphere 84.7
2848 Male, age 76, right hemisphere 80.3
Subiculum
nTPM: 61.4
1901 Male, age 80, both hemispheres 79.3
1977 Female, age 85, both hemispheres 70.3
2438 Female, age 94, left hemisphere 61.5
2619 Male, age 74, both hemispheres 60.5
2042 Male, age 76, both hemispheres 60.0
2729 Female, age 91, right hemisphere 36.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 92.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.1
Samples: 197

Max nTPM: 165.0
Min nTPM: 57.3
Std nTPM: 18.7
Median nTPM: 88.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 157.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 143.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 140.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 139.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 139.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 138.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 131.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 130.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 129.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 129.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 263.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 263.6
FF:10153-102I9 76 years, female 265.7
FF:10169-103B7 60 years, female 261.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 172.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 170.1
Samples: 4

Max nTPM: 211.4
Min nTPM: 123.5
Sample A Female 211.4
Sample B Female 174.7
Sample C Male 170.8
Sample D Male 123.5
Entorhinal cortex
nTPM: 171.5
Samples: 4

Max nTPM: 203.3
Min nTPM: 147.9
Sample A Female 164.1
Sample B Female 203.3
Sample C Male 170.5
Sample D Male 147.9
Subiculum
nTPM: 172.0
Samples: 4

Max nTPM: 215.7
Min nTPM: 150.4
Sample A Female 215.7
Sample B Female 158.0
Sample C Male 163.9
Sample D Male 150.4
Ventral hippocampus
nTPM: 166.3
Samples: 4

Max nTPM: 181.8
Min nTPM: 137.9
Sample A Female 174.2
Sample B Female 137.9
Sample C Male 181.8
Sample D Male 171.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 446.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 446.0
Samples: 4

Max nTPM: 492.3
Min nTPM: 415.9
Sample A Male 415.9
Sample B Male 441.2
Sample C Female 434.6
Sample D Female 492.3
Hippocampal formation
nTPM: 424.6
Samples: 4

Max nTPM: 444.2
Min nTPM: 395.7
Sample A Male 444.2
Sample B Male 424.9
Sample C Female 433.5
Sample D Female 395.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
70429369 Antisense, RP_050614_01_E07, Mouse strain C57BL/6J (56 days, male) 19.4
75931623 Antisense, RP_060606_01_E09, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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