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CPE
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1105.5 nTPM
FANTOM5:1694.0 Scaled Tags Per Million
Pig:473.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003819Antibody CAB024907
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1105.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1105.5
Samples: 246

Max nTPM: 2553.1
Min nTPM: 201.0
Std nTPM: 381.8
Median nTPM: 1053.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2553.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 2437.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2099.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2042.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2024.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1985.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1975.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1961.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1961.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1937.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1921.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1856.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1832.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1825.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1779.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1755.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1737.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1725.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1672.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1668.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1667.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1646.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1617.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1611.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1608.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1569.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1552.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1531.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1524.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1521.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1518.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1514.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1508.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1492.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1486.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1471.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1471.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1453.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1444.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1435.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1434.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1433.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1432.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1431.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1410.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1405.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1404.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1404.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1395.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1394.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1391.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1386.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1379.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1368.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1344.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1342.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1328.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1322.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1320.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1318.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1313.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1311.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1296.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1294.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1292.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1290.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1282.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1274.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1273.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1266.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1266.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1265.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1256.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1253.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1252.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1246.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1242.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1240.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1234.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1222.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1221.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1200.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1199.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1192.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1191.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1190.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1188.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1185.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1178.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1177.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1176.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1175.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1173.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1172.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1156.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1155.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1154.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1151.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1143.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1141.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1137.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1137.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1134.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1129.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1127.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1124.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1123.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1107.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1102.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1101.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1099.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1098.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1094.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1093.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1084.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1077.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1072.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1071.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1070.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1068.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1068.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1058.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1054.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1051.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1051.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1051.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1050.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1049.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1047.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1047.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1046.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1044.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1043.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1042.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1041.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1037.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1034.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1034.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1032.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1028.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1026.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1026.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1018.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1017.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1015.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1010.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1008.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1006.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1000.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 999.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 999.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 993.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 990.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 986.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 985.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 976.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 971.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 968.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 963.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 957.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 957.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 953.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 950.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 943.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 940.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 940.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 939.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 931.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 910.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 908.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 906.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 900.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 900.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 899.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 893.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 890.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 888.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 888.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 887.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 886.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 884.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 883.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 882.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 879.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 866.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 865.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 862.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 861.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 857.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 846.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 843.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 840.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 835.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 821.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 819.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 819.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 816.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 790.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 790.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 789.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 785.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 782.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 779.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 771.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 767.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 753.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 753.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 751.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 749.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 748.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 725.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 722.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 720.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 702.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 697.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 695.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 690.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 683.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 683.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 671.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 668.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 668.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 662.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 658.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 655.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 643.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 634.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 632.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 630.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 628.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 625.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 611.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 606.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 587.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 585.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 478.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 464.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 414.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 398.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 364.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 333.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 324.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 312.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 299.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 206.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 201.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1694.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1694.0
FF:10164-103B2 76 years, female 1694.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 473.6
Pig sample Sample description nTPM
Caudate
nTPM: 473.6
Samples: 4

Max nTPM: 583.3
Min nTPM: 421.6
Sample A Female 421.6
Sample B Female 466.6
Sample C Male 583.3
Sample D Male 422.8

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