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RPL34
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1002.0 nTPM
HPA:1002.0 nTPM
GTEx:2168.8 nTPM
FANTOM5:28.0 Scaled Tags Per Million
Pig:288.3 nTPM
Mouse:694.2 nTPM
Allen mouse:5.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1002.0
Sample id Sample description nTPM
Amygdala
nTPM: 1002.0
2814 Male, age 76, right hemisphere 1035.3
2695 Female, age 67, right hemisphere 1032.3
2514 Male, age 75, right hemisphere 1002.2
1987 Female, age 91, left hemisphere 970.8
2517 Female, age 94, left hemisphere 969.6
Basal amygdala
nTPM: 958.5
2827 Female, age 67, right hemisphere 994.3
1955 Male, age 76, both hemispheres 964.3
2110 Male, age 80, left hemisphere 962.6
2609 Male, age 75, right hemisphere 956.2
2685 Female, age 94, left hemisphere 950.5
2243 Female, age 91, right hemisphere 922.8
Central amygdala
nTPM: 981.1
2826 Female, age 94, left hemisphere 1042.7
1905 Male, age 76, both hemispheres 1004.0
2515 Male, age 75, right hemisphere 988.7
2239 Male, age 80, left hemisphere 939.1
2701 Female, age 91, right hemisphere 930.9
Corticomedial amygdala
nTPM: 958.7
2428 Male, age 75, right hemisphere 970.9
2240 Male, age 76, both hemispheres 967.6
2829 Male, age 80, left hemisphere 964.8
2429 Female, age 94, left hemisphere 960.1
2535 Female, age 67, right hemisphere 952.2
2242 Female, age 91, right hemisphere 936.5
Lateral amygdala
nTPM: 984.8
2830 Female, age 67, right hemisphere 1038.8
2516 Male, age 75, right hemisphere 1024.5
2534 Female, age 94, left hemisphere 995.3
1883 Male, age 76, both hemispheres 979.4
2256 Male, age 80, left hemisphere 945.7
2255 Female, age 91, right hemisphere 925.4
Stria terminalis, bed nucleus
nTPM: 939.1
1974 Female, age 91, both hemispheres 960.7
2201 Male, age 74, unknown 930.2
2486 Female, age 94, both hemispheres 926.2

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2168.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 2168.8
Samples: 152

Max nTPM: 7810.8
Min nTPM: 933.8
Std nTPM: 1073.7
Median nTPM: 1888.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 7810.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 7210.2
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 6656.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 5867.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 4985.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 4340.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 4315.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 3998.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 3989.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 3558.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 3382.3
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 3364.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 3292.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 3286.1
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 3273.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 3198.0
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 3167.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 3076.0
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 3032.6
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 3018.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 2979.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2970.1
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2965.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 2926.1
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 2879.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 2825.7
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 2807.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 2781.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 2777.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 2723.5
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 2682.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 2647.9
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 2594.8
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 2589.6
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 2543.4
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 2540.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 2483.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 2432.7
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 2428.1
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 2404.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 2399.5
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 2387.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 2373.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 2354.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 2333.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 2313.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 2311.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 2302.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 2293.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 2279.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 2267.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 2263.4
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 2251.0
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 2245.9
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 2244.0
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 2233.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 2230.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 2170.7
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 2167.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 2162.6
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 2122.9
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 2090.2
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 2072.5
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 2062.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 2061.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 2046.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 2046.8
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 2044.4
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 2034.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 2002.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1996.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1969.5
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1959.5
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1938.2
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1890.6
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1890.2
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1886.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1871.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1860.7
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1857.3
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1840.7
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 1830.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1809.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1803.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1787.2
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1782.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 1774.6
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1774.5
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1767.2
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1754.8
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 1747.1
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1747.1
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1730.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1730.2
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1728.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1723.8
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1721.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1715.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1707.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1698.5
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1664.0
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1634.4
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1624.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1615.4
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 1614.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1598.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 1588.2
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1583.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1583.2
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1572.7
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1567.7
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 1554.7
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 1541.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1525.9
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 1521.3
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1502.0
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1491.8
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1475.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1448.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1444.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 1396.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1385.6
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 1369.3
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 1365.1
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1364.3
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 1343.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 1340.5
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 1338.1
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 1327.3
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 1323.4
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1322.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1311.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 1298.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 1289.6
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 1274.1
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 1260.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1253.0
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 1225.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 1199.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1186.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 1185.9
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 1183.3
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1181.2
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 1142.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 1107.1
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 1104.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 1076.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 1076.3
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 1074.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 1002.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 998.8
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 933.8
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 28.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 28.0
FF:10151-102I7 76 years, female 28.0

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 288.3
Pig sample Sample description nTPM
Amygdala
nTPM: 288.3
Samples: 4

Max nTPM: 379.5
Min nTPM: 162.1
Sample A Female 329.5
Sample B Female 379.5
Sample C Male 282.0
Sample D Male 162.1

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 694.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 694.2
Samples: 4

Max nTPM: 717.7
Min nTPM: 644.2
Sample A Male 644.2
Sample B Male 709.0
Sample C Female 717.7
Sample D Female 705.8

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 5.3
68744869 Antisense, RP_050208_01_G10, Mouse strain C57BL/6J (56 days, male) 5.3

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