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RPL34
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  • RPL34
BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1033.0 nTPM
HPA:1033.0 nTPM
FANTOM5:21.1 Scaled Tags Per Million
Pig:419.1 nTPM
Mouse:774.8 nTPM
Allen mouse:4.6 Expression energy

THALAMUS - HPA Brain RNA-seq
Max nTPM 1033.0
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 962.7
2396 Male, age 61, right hemisphere 973.1
2032 Female, age 42, unknown 957.7
2497 Male, age 66, unknown 957.2
Centromedial thalamic nucleus
nTPM: 954.5
2401 Male, age 76, right hemisphere 978.6
2279 Female, age 85, left hemisphere 930.4
Habenula
nTPM: 960.2
1957 Male, age 80, both hemispheres 989.5
2203 Male, age 61, left hemisphere 966.0
2252 Male, age 62, unknown 951.3
2276 Male, age 66, unknown 934.0
Lateral geniculate body
nTPM: 968.4
2575 Female, age 94, right hemisphere 1007.3
2857 Male, age 74, right hemisphere 974.4
2106 Female, age 67, right hemisphere 970.5
2841 Male, age 80, both hemispheres 968.4
1953 Male, age 62, unknown 964.4
2035 Female, age 72, unknown 961.0
2659 Male, age 66, unknown 952.3
2399 Male, age 61, left hemisphere 948.9
Lateral thalamic nuclei
nTPM: 987.2
2765 Female, age 67, both hemispheres 1003.3
2573 Female, age 94, left hemisphere 986.9
1903 Male, age 76, left hemisphere 984.0
2577 Male, age 74, both hemispheres 983.2
2661 Female, age 72, unknown 978.6
Medial dorsal thalamic nucleus
nTPM: 974.2
2572 Female, age 94, right hemisphere 1051.4
1859 Male, age 76, both hemispheres 1003.0
1930 Female, age 42, unknown 984.5
1971 Male, age 61, right hemisphere 982.4
1810 Male, age 48, unknown 977.7
2402 Female, age 67, both hemispheres 974.0
2026 Male, age 62, unknown 971.1
2283 Male, age 80, right hemisphere 967.3
2576 Male, age 74, both hemispheres 956.8
2498 Male, age 66, unknown 956.4
2660 Female, age 72, unknown 953.5
2039 Female, age 72, unknown 944.5
2492 Male, age 75, right hemisphere 942.5
Medial geniculate body
nTPM: 979.7
1811 Female, age 42, unknown 1029.2
2571 Male, age 75, right hemisphere 997.9
2650 Female, age 94, left hemisphere 984.1
2049 Male, age 76, both hemispheres 964.2
2207 Male, age 80, right hemisphere 964.1
2657 Male, age 74, right hemisphere 962.7
2217 Female, age 72, unknown 955.3
Nucleus reuniens
nTPM: 967.7
2212 Female, age 67, left hemisphere 977.0
2210 Female, age 85, left hemisphere 965.4
2205 Male, age 80, left hemisphere 960.5
Nucleus rhomboideus
nTPM: 961.3
2206 Male, age 80, both hemispheres 978.3
2213 Female, age 67, left hemisphere 966.8
2280 Female, age 85, left hemisphere 938.8
Posterior thalamic nucleus
nTPM: 1033.0
2649 Female, age 94, both hemispheres 1187.4
2266 Male, age 76, right hemisphere 996.7
2655 Male, age 74, right hemisphere 991.3
2495 Female, age 67, right hemisphere 956.6
Pulvinar
nTPM: 970.6
2496 Female, age 67, right hemisphere 997.5
1929 Male, age 48, unknown 988.1
2499 Male, age 66, unknown 986.1
2214 Male, age 76, right hemisphere 982.2
1932 Male, age 80, right hemisphere 972.5
1972 Male, age 62, unknown 970.9
2724 Male, age 74, right hemisphere 958.9
1899 Female, age 42, unknown 955.9
2398 Male, age 61, left hemisphere 948.6
2582 Female, age 72, unknown 945.2
Subthalamic nucleus
nTPM: 957.5
2658 Male, age 74, both hemispheres 997.6
2275 Male, age 66, unknown 973.0
2056 Female, age 72, unknown 966.0
2124 Male, age 62, unknown 960.0
2282 Male, age 61, both hemispheres 948.2
2779 Female, age 42, unknown 946.2
2216 Male, age 48, unknown 935.8
2406 Female, age 72, unknown 933.3
Ventral posterolateral thalamic nucleus
nTPM: 959.2
2197 Male, age 80, both hemispheres 993.6
2578 Male, age 74, both hemispheres 978.4
2740 Male, age 76, right hemisphere 960.5
2397 Male, age 61, right hemisphere 957.3
2570 Male, age 75, right hemisphere 937.9
2581 Female, age 72, unknown 927.3
Ventral posteromedial thalamic nucleus
nTPM: 968.5
2758 Male, age 80, both hemispheres 978.9
2653 Male, age 74, both hemispheres 978.4
2202 Male, age 61, left hemisphere 966.4
2127 Male, age 76, right hemisphere 963.8
2281 Male, age 75, right hemisphere 955.1
Ventral thalamic nuclei
nTPM: 972.9
1860 Male, age 76, both hemispheres 1010.5
1912 Female, age 42, unknown 985.8
2291 Female, age 72, unknown 980.7
2285 Male, age 62, unknown 978.7
2580 Male, age 66, unknown 978.3
1845 Male, age 48, unknown 972.9
2652 Male, age 74, left hemisphere 962.5
2204 Male, age 80, both hemispheres 951.1
2858 Female, age 72, unknown 935.4
Ventromedial nucleus
nTPM: 968.8
1982 Female, age 72, unknown 982.9
1822 Female, age 42, unknown 954.6
Zona incerta
nTPM: 966.8
2822 Male, age 74, right hemisphere 1008.3
2215 Male, age 66, unknown 996.1
2403 Male, age 62, unknown 950.5
2208 Male, age 80, right hemisphere 940.9
2663 Female, age 72, unknown 938.2

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 21.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 21.1
FF:10154-103A1 76 years, female 21.1

THALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 419.1
Pig sample Sample description nTPM
Thalamus
nTPM: 419.0
Samples: 4

Max nTPM: 522.5
Min nTPM: 309.4
Sample A Female 522.5
Sample B Female 309.4
Sample C Male 437.4
Sample D Male 406.8

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 774.8
Mouse sample Sample description nTPM
Thalamus
nTPM: 774.8
Samples: 4

Max nTPM: 843.9
Min nTPM: 701.4
Sample A Male 787.5
Sample B Male 766.3
Sample C Female 843.9
Sample D Female 701.4

THALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Thalamus
Expression energy: 4.6
68744869 Antisense, RP_050208_01_G10, Mouse strain C57BL/6J (56 days, male) 4.6

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