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RPL34
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  • RPL34
BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

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No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:1015.1 nTPM
HPA:1015.1 nTPM
FANTOM5:28.3 Scaled Tags Per Million
Pig:465.2 nTPM
Allen mouse:5.0 Expression energy

PONS - HPA Brain RNA-seq
Max nTPM 1015.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 991.9
2188 Female, age 91, both hemispheres 1029.1
2090 Male, age 80, both hemispheres 1001.2
2301 Female, age 85, both hemispheres 968.8
1984 Male, age 76, both hemispheres 968.4
Dorsal cochlear nucleus
nTPM: 991.9
2802 Male, age 74, right hemisphere 1016.6
2187 Female, age 91, both hemispheres 1005.9
2378 Male, age 80, both hemispheres 990.2
2370 Male, age 61, both hemispheres 985.7
2058 Male, age 76, both hemispheres 961.3
Dorsal tegmental nucleus
nTPM: 981.8
2326 Male, age 74, both hemispheres 1023.1
2083 Male, age 80, both hemispheres 985.4
1936 Male, age 76, left hemisphere 974.3
2358 Male, age 61, both hemispheres 944.2
Dorsolateral tegmental area
nTPM: 984.1
2654 Male, age 80, both hemispheres 1008.5
2751 Female, age 85, both hemispheres 1004.4
2360 Male, age 74, both hemispheres 997.1
2337 Male, age 61, both hemispheres 960.8
2141 Male, age 76, both hemispheres 949.9
Kolliker-Fuse nucleus
nTPM: 980.5
2315 Male, age 76, right hemisphere 993.4
2793 Female, age 91, left hemisphere 980.6
2163 Male, age 80, both hemispheres 967.6
Lateral lemniscal nuclei
nTPM: 965.3
2746 Female, age 85, left hemisphere 975.4
2169 Male, age 76, both hemispheres 971.1
2453 Male, age 74, right hemisphere 965.6
2036 Male, age 80, both hemispheres 958.5
2320 Female, age 91, left hemisphere 956.1
Lateral parabrachial nucleus
nTPM: 984.9
2792 Male, age 76, both hemispheres 1011.6
2013 Male, age 80, both hemispheres 999.7
2139 Female, age 85, right hemisphere 976.0
2790 Male, age 61, both hemispheres 952.1
Lateral vestibular nucleus
nTPM: 965.3
2311 Male, age 80, both hemispheres 984.2
2184 Male, age 76, both hemispheres 946.3
Locus coeruleus
nTPM: 958.9
2720 Male, age 74, both hemispheres 974.8
2788 Male, age 74, unknown 965.2
2123 Female, age 91, both hemispheres 962.5
2162 Male, age 80, both hemispheres 960.0
2014 Male, age 55, unknown 954.1
2317 Female, age 72, unknown 953.0
1980 Male, age 76, both hemispheres 942.9
Medial olivary nucleus
nTPM: 1015.1
1943 Male, age 61, both hemispheres 1050.4
1962 Male, age 76, both hemispheres 1017.8
2138 Female, age 91, both hemispheres 1015.9
2851 Male, age 80, both hemispheres 976.4
Medial parabrachial nucleus
nTPM: 978.5
2170 Female, age 91, both hemispheres 1018.3
2463 Female, age 85, right hemisphere 984.3
2854 Male, age 80, both hemispheres 974.1
2786 Male, age 76, both hemispheres 965.3
2156 Male, age 61, both hemispheres 950.4
Medial periolivary nuclei
nTPM: 981.9
2063 Male, age 76, both hemispheres 1014.3
2081 Male, age 80, both hemispheres 982.2
2791 Male, age 74, right hemisphere 979.4
2458 Female, age 91, both hemispheres 976.8
2171 Female, age 85, both hemispheres 956.8
Motor facial nucleus
nTPM: 973.6
2062 Male, age 76, both hemispheres 997.4
2126 Male, age 61, both hemispheres 987.5
2795 Female, age 91, both hemispheres 975.0
2365 Male, age 74, right hemisphere 974.3
2697 Female, age 85, both hemispheres 970.5
2327 Male, age 80, both hemispheres 937.0
Motor trigeminal nucleus
nTPM: 969.0
2321 Female, age 91, both hemispheres 975.8
2560 Male, age 74, both hemispheres 974.9
2309 Male, age 76, both hemispheres 971.9
2079 Male, age 80, both hemispheres 963.2
2335 Male, age 61, both hemispheres 959.4
Nuclei of the trapezoid body
nTPM: 981.7
1983 Male, age 76, both hemispheres 1020.3
2159 Male, age 61, both hemispheres 976.6
2368 Female, age 91, both hemispheres 974.2
2735 Female, age 85, both hemispheres 971.4
2166 Male, age 80, both hemispheres 966.3
Paramedian reticular nucleus
nTPM: 987.6
2052 Male, age 76, both hemispheres 1001.9
2057 Male, age 80, both hemispheres 988.9
2313 Male, age 61, both hemispheres 984.8
2050 Female, age 85, both hemispheres 974.7
Pontine nuclei
nTPM: 983.7
2319 Female, age 91, both hemispheres 1012.6
1968 Male, age 76, left hemisphere 998.4
2454 Male, age 74, left hemisphere 992.1
2727 Male, age 61, right hemisphere 986.4
1863 Male, age 55, unknown 981.2
2109 Female, age 72, unknown 973.2
2115 Male, age 80, left hemisphere 969.0
2787 Female, age 85, both hemispheres 956.6
Pontine raphe nucleus
nTPM: 973.3
2122 Female, age 85, midline 976.9
2853 Male, age 76, midline 969.6
Posteroventral cochlear nucleus
nTPM: 1011.4
2135 Female, age 91, both hemispheres 1066.8
2341 Male, age 80, both hemispheres 1039.5
2371 Male, age 61, both hemispheres 1005.4
2752 Female, age 85, both hemispheres 989.2
2070 Male, age 76, both hemispheres 956.2
Principal sensory trigeminal nucleus
nTPM: 962.7
2158 Male, age 61, both hemispheres 973.8
2367 Female, age 91, left hemisphere 970.5
2008 Male, age 80, left hemisphere 963.2
2324 Male, age 76, both hemispheres 943.5
Reticular pontine nucleus, caudal
nTPM: 984.5
2559 Male, age 74, both hemispheres 1013.4
2457 Female, age 91, both hemispheres 995.4
2092 Male, age 76, both hemispheres 992.5
2332 Male, age 80, right hemisphere 936.7
Reticular pontine nucleus, oral
nTPM: 985.7
2366 Female, age 91, both hemispheres 1010.6
1939 Male, age 80, both hemispheres 990.4
2361 Male, age 74, both hemispheres 987.8
2167 Male, age 76, both hemispheres 970.4
2012 Female, age 85, both hemispheres 969.3
Reticulotegmental nucleus
nTPM: 968.9
2452 Male, age 74, both hemispheres 1000.9
2322 Female, age 91, both hemispheres 969.3
2325 Male, age 76, both hemispheres 955.2
2333 Male, age 80, both hemispheres 950.3
Spinal trigeminal nucleus, oral
nTPM: 964.8
1978 Male, age 76, both hemispheres 965.7
2737 Female, age 85, both hemispheres 965.3
2164 Male, age 80, both hemispheres 963.4
Subcoeruleus area
nTPM: 986.9
2451 Male, age 74, both hemispheres 1022.9
2369 Female, age 85, left hemisphere 1007.5
2089 Male, age 76, left hemisphere 974.2
1958 Male, age 80, both hemispheres 970.5
2323 Female, age 91, left hemisphere 959.5
Superior olive
nTPM: 977.2
2020 Male, age 76, both hemispheres 1020.8
2364 Male, age 74, right hemisphere 977.6
1875 Female, age 85, both hemispheres 976.2
2561 Female, age 91, both hemispheres 969.0
2329 Male, age 80, right hemisphere 942.5
Superior vestibular nucleus
nTPM: 993.4
2383 Male, age 74, both hemispheres 1012.6
2015 Male, age 80, both hemispheres 1003.3
2061 Male, age 76, both hemispheres 964.4
Ventral periolivary nuclei
nTPM: 982.4
2023 Male, age 76, both hemispheres 1018.0
2794 Female, age 91, left hemisphere 982.1
2165 Male, age 80, both hemispheres 971.4
2130 Female, age 85, both hemispheres 958.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 966.7
1959 Male, age 76, both hemispheres 984.9
2456 Female, age 91, both hemispheres 979.6
2161 Male, age 80, both hemispheres 970.3
2449 Male, age 74, both hemispheres 956.3
2840 Female, age 85, both hemispheres 955.7
2359 Male, age 61, both hemispheres 953.2

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 28.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 28.3
FF:10165-103B3 76 years, female 29.2
FF:10182-103D2 60 years, female 27.4
Pons
Scaled Tags Per Million: 22.5
FF:10033-101E6 18-54 years, mixed 22.5

PONS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 465.2
Pig sample Sample description nTPM
Pons
nTPM: 465.2
Samples: 4

Max nTPM: 581.8
Min nTPM: 360.9
Sample A Female 475.4
Sample B Female 360.9
Sample C Male 581.8
Sample D Male 442.8

PONS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Pons
Expression energy: 5.0
68744869 Antisense, RP_050208_01_G10, Mouse strain C57BL/6J (56 days, male) 5.0

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