HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:535.1 nTPM
HPA:535.1 nTPM
GTEx:449.7 nTPM
FANTOM5:1123.2 Scaled Tags Per Million
Pig:885.7 nTPM
Mouse:1666.7 nTPM
Allen mouse:24.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052504Antibody CAB002056
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 535.1
Sample id Sample description nTPM
Hippocampus
nTPM: 473.4
1898 Male, age 80, left hemisphere 571.3
1855 Male, age 76, left hemisphere 491.5
2529 Female, age 94, left hemisphere 489.8
2621 Female, age 67, right hemisphere 465.9
1911 Female, age 85, right hemisphere 416.5
2148 Female, age 91, left hemisphere 405.1
Dentate gyrus
nTPM: 464.0
2010 Male, age 76, both hemispheres 535.1
1927 Female, age 91, both hemispheres 514.9
2246 Female, age 85, both hemispheres 461.9
2528 Male, age 74, both hemispheres 460.4
2530 Female, age 94, left hemisphere 448.1
2531 Female, age 67, both hemispheres 363.4
Entorhinal gyrus
nTPM: 420.3
1938 Female, age 85, left hemisphere 493.9
2764 Male, age 80, right hemisphere 478.2
1787 Male, age 76, left hemisphere 456.2
2117 Female, age 91, right hemisphere 401.2
2686 Male, age 75, right hemisphere 351.0
2613 Female, age 94, left hemisphere 341.3
Hippocampus, CA1
nTPM: 535.1
2749 Male, age 80, left hemisphere 722.5
2045 Male, age 76, both hemispheres 547.6
1873 Female, age 85, both hemispheres 524.1
2527 Male, age 74, both hemispheres 470.6
2082 Female, age 91, right hemisphere 410.8
Hippocampus, CA2
nTPM: 499.8
1892 Male, age 76, both hemispheres 684.3
1963 Male, age 80, left hemisphere 543.8
2249 Male, age 74, both hemispheres 511.9
2437 Female, age 94, left hemisphere 435.5
1940 Female, age 85, left hemisphere 420.3
2113 Female, age 91, right hemisphere 403.1
Hippocampus, CA3
nTPM: 497.6
1867 Male, age 76, both hemispheres 624.6
2137 Male, age 80, left hemisphere 586.2
2436 Male, age 74, both hemispheres 548.0
2620 Female, age 94, left hemisphere 441.8
1891 Female, age 85, both hemispheres 428.2
2861 Female, age 67, both hemispheres 356.9
Parahippocampal cortex
nTPM: 444.8
1850 Male, age 80, both hemispheres 532.0
1933 Female, age 85, both hemispheres 493.1
1990 Female, age 91, right hemisphere 474.5
2250 Female, age 67, right hemisphere 468.2
2245 Female, age 91, both hemispheres 459.5
2532 Female, age 72, left hemisphere 457.6
2018 Male, age 76, both hemispheres 436.5
2692 Male, age 74, both hemispheres 389.6
2693 Female, age 94, both hemispheres 371.7
2622 Female, age 67, right hemisphere 365.0
Perirhinal gyrus
nTPM: 518.1
1847 Female, age 91, left hemisphere 607.1
1841 Female, age 85, right hemisphere 524.2
1794 Male, age 80, right hemisphere 515.8
2848 Male, age 76, right hemisphere 501.7
2521 Female, age 94, right hemisphere 441.7
Subiculum
nTPM: 458.5
1901 Male, age 80, both hemispheres 497.6
1977 Female, age 85, both hemispheres 474.7
2042 Male, age 76, both hemispheres 474.4
2438 Female, age 94, left hemisphere 472.2
2619 Male, age 74, both hemispheres 440.1
2729 Female, age 91, right hemisphere 392.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 449.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 449.7
Samples: 197

Max nTPM: 1795.0
Min nTPM: 166.1
Std nTPM: 211.1
Median nTPM: 406.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 1795.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1301.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1162.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 1124.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 971.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 943.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 935.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 916.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 837.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 811.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 806.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1123.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1123.2
FF:10153-102I9 76 years, female 1170.8
FF:10169-103B7 60 years, female 1075.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 885.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 885.7
Samples: 4

Max nTPM: 1119.2
Min nTPM: 674.1
Sample A Female 1119.2
Sample B Female 931.9
Sample C Male 817.6
Sample D Male 674.1
Entorhinal cortex
nTPM: 768.2
Samples: 4

Max nTPM: 915.7
Min nTPM: 623.8
Sample A Female 826.0
Sample B Female 915.7
Sample C Male 707.3
Sample D Male 623.8
Subiculum
nTPM: 710.0
Samples: 4

Max nTPM: 870.4
Min nTPM: 601.4
Sample A Female 870.4
Sample B Female 638.2
Sample C Male 601.4
Sample D Male 730.1
Ventral hippocampus
nTPM: 757.6
Samples: 4

Max nTPM: 989.3
Min nTPM: 549.7
Sample A Female 989.3
Sample B Female 549.7
Sample C Male 685.9
Sample D Male 805.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1666.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1572.1
Samples: 4

Max nTPM: 1743.5
Min nTPM: 1358.3
Sample A Male 1358.3
Sample B Male 1612.2
Sample C Female 1574.5
Sample D Female 1743.5
Hippocampal formation
nTPM: 1666.7
Samples: 4

Max nTPM: 1766.0
Min nTPM: 1624.8
Sample A Male 1642.6
Sample B Male 1624.8
Sample C Female 1766.0
Sample D Female 1633.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.8
75694450 Antisense, RP_060518_03_G08, Mouse strain C57BL/6J (56 days, male) 24.8

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