HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:165.0 nTPM
HPA:165.0 nTPM
GTEx:170.8 nTPM
FANTOM5:1499.9 Scaled Tags Per Million
Pig:273.0 nTPM
Mouse:306.2 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006773Antibody HPA016965Antibody CAB005163
Glial cells LowNot detectedLow
Neuronal cells HighMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 165.0
Sample id Sample description nTPM
Hippocampus
nTPM: 163.1
1898 Male, age 80, left hemisphere 180.5
2621 Female, age 67, right hemisphere 165.2
2529 Female, age 94, left hemisphere 163.9
1855 Male, age 76, left hemisphere 161.5
2148 Female, age 91, left hemisphere 156.8
1911 Female, age 85, right hemisphere 150.8
Dentate gyrus
nTPM: 156.0
2010 Male, age 76, both hemispheres 169.4
2530 Female, age 94, left hemisphere 166.2
1927 Female, age 91, both hemispheres 161.5
2528 Male, age 74, both hemispheres 154.1
2246 Female, age 85, both hemispheres 149.8
2531 Female, age 67, both hemispheres 134.7
Entorhinal gyrus
nTPM: 155.3
2117 Female, age 91, right hemisphere 166.0
1938 Female, age 85, left hemisphere 159.1
1787 Male, age 76, left hemisphere 157.4
2764 Male, age 80, right hemisphere 157.2
2613 Female, age 94, left hemisphere 148.5
2686 Male, age 75, right hemisphere 143.6
Hippocampus, CA1
nTPM: 162.3
2749 Male, age 80, left hemisphere 202.5
1873 Female, age 85, both hemispheres 172.1
2527 Male, age 74, both hemispheres 157.1
2045 Male, age 76, both hemispheres 140.8
2082 Female, age 91, right hemisphere 139.0
Hippocampus, CA2
nTPM: 163.7
1892 Male, age 76, both hemispheres 183.7
1963 Male, age 80, left hemisphere 182.1
2249 Male, age 74, both hemispheres 161.4
2437 Female, age 94, left hemisphere 156.1
1940 Female, age 85, left hemisphere 153.7
2113 Female, age 91, right hemisphere 145.4
Hippocampus, CA3
nTPM: 165.0
2436 Male, age 74, both hemispheres 192.8
2137 Male, age 80, left hemisphere 174.3
1867 Male, age 76, both hemispheres 173.1
1891 Female, age 85, both hemispheres 160.1
2620 Female, age 94, left hemisphere 150.4
2861 Female, age 67, both hemispheres 139.5
Parahippocampal cortex
nTPM: 155.7
1850 Male, age 80, both hemispheres 172.6
2692 Male, age 74, both hemispheres 164.7
2532 Female, age 72, left hemisphere 159.1
1990 Female, age 91, right hemisphere 158.8
2250 Female, age 67, right hemisphere 158.0
1933 Female, age 85, both hemispheres 157.5
2245 Female, age 91, both hemispheres 155.4
2018 Male, age 76, both hemispheres 148.7
2622 Female, age 67, right hemisphere 144.2
2693 Female, age 94, both hemispheres 138.5
Perirhinal gyrus
nTPM: 159.6
1794 Male, age 80, right hemisphere 166.5
1847 Female, age 91, left hemisphere 166.0
1841 Female, age 85, right hemisphere 165.5
2521 Female, age 94, right hemisphere 152.1
2848 Male, age 76, right hemisphere 148.0
Subiculum
nTPM: 158.8
2619 Male, age 74, both hemispheres 170.6
1901 Male, age 80, both hemispheres 164.9
1977 Female, age 85, both hemispheres 159.0
2042 Male, age 76, both hemispheres 157.8
2438 Female, age 94, left hemisphere 150.7
2729 Female, age 91, right hemisphere 149.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 170.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 170.8
Samples: 197

Max nTPM: 271.2
Min nTPM: 100.7
Std nTPM: 28.8
Median nTPM: 165.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 271.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 259.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 257.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 244.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 235.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 234.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 233.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 230.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 230.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 227.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 225.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1499.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1499.9
FF:10169-103B7 60 years, female 1965.0
FF:10153-102I9 76 years, female 1034.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 273.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 273.0
Samples: 4

Max nTPM: 340.3
Min nTPM: 214.2
Sample A Female 340.3
Sample B Female 249.8
Sample C Male 287.8
Sample D Male 214.2
Entorhinal cortex
nTPM: 265.9
Samples: 4

Max nTPM: 291.5
Min nTPM: 227.8
Sample A Female 280.4
Sample B Female 291.5
Sample C Male 263.7
Sample D Male 227.8
Subiculum
nTPM: 262.9
Samples: 4

Max nTPM: 330.0
Min nTPM: 228.6
Sample A Female 330.0
Sample B Female 235.2
Sample C Male 228.6
Sample D Male 257.9
Ventral hippocampus
nTPM: 240.9
Samples: 4

Max nTPM: 272.9
Min nTPM: 196.9
Sample A Female 272.9
Sample B Female 196.9
Sample C Male 248.9
Sample D Male 244.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 306.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 291.8
Samples: 4

Max nTPM: 300.3
Min nTPM: 285.1
Sample A Male 285.1
Sample B Male 289.5
Sample C Female 292.4
Sample D Female 300.3
Hippocampal formation
nTPM: 306.2
Samples: 4

Max nTPM: 321.8
Min nTPM: 292.9
Sample A Male 301.5
Sample B Male 308.5
Sample C Female 321.8
Sample D Female 292.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
69671965 Antisense, RP_050428_02_G01, Mouse strain C57BL/6J (56 days, male) 17.4
70795766 Antisense, RP_050712_01_H11, Mouse strain C57BL/6J (56 days, male) 0.1

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