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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 407.0
Min nTPM: 176.4
Std nTPM: 45.4
Median nTPM:
490_1
67 years, female
407.0
414_1
84 years, female
381.0
491_1
89 years, female
372.5
413_1
59 years, female
365.5
415_1
77 years, female
351.6
466_1
57 years, female
326.4
162_1
79 years, female
326.1
495_1
57 years, female
320.8
99_1
64 years, male
316.7
308_1
70 years, female
312.2
315_1
62 years, female
312.2
89_1
63 years, male
310.2
32_1
67 years, male
309.9
119_1
70 years, female
308.6
126_1
63 years, male
308.4
307_1
66 years, female
308.1
117_1
61 years, male
306.1
149_1
88 years, male
303.3
266_1
85 years, male
300.5
526_1
61 years, male
299.9
347_1
72 years, male
298.7
324_1
76 years, male
297.4
81_1
67 years, male
296.9
246_1
77 years, male
296.9
115_1
83 years, male
293.4
42_1
85 years, male
290.9
109_1
81 years, female
289.6
229_1
69 years, female
288.3
9_1
66 years, female
287.8
120_1
70 years, female
285.6
142_1
61 years, female
283.6
468_1
89 years, male
281.0
137_1
83 years, male
279.3
313_1
79 years, female
279.3
189_1
76 years, male
278.9
35_1
74 years, female
274.8
499_1
55 years, female
273.0
173_1
67 years, male
271.8
501_1
88 years, male
271.3
243_1
75 years, male
269.2
18_1
88 years, male
267.4
317_1
60 years, male
265.7
311_1
78 years, male
265.0
375_1
74 years, female
258.3
153_1
70 years, female
258.0
518_1
75 years, female
257.7
425_1
59 years, female
255.8
386_1
76 years, male
254.4
6_1
73 years, female
252.6
217_1
76 years, male
251.9
251_1
78 years, male
251.9
172_1
72 years, female
250.1
145_1
84 years, male
249.7
17_1
71 years, male
247.3
43_1
64 years, female
247.3
355_1
70 years, female
247.0
447_1
81 years, male
246.6
177_1
74 years, male
246.4
406_1
79 years, male
246.1
41_1
94 years, female
246.0
237_1
82 years, male
245.2
335_1
73 years, female
244.7
404_1
82 years, female
243.5
291_1
76 years, male
242.9
389_1
86 years, female
242.9
288_1
66 years, female
241.3
292_1
71 years, male
241.1
293_1
68 years, female
238.2
503_1
68 years, male
237.7
254_1
77 years, female
237.5
405_1
91 years, male
234.2
379_1
60 years, male
234.1
377_1
82 years, female
232.4
2_1
77 years, female
232.3
265_1
87 years, male
230.0
517_1
88 years, male
230.0
352_1
62 years, male
229.6
139_1
64 years, female
229.4
384_1
83 years, male
225.3
376_1
75 years, female
222.1
314_1
67 years, male
222.0
319_1
81 years, male
220.9
349_1
83 years, male
220.5
321_1
62 years, female
220.0
396_1
62 years, male
219.6
480_1
63 years, male
219.1
394_1
75 years, female
218.3
348_1
84 years, male
218.1
351_1
91 years, male
216.3
350_1
84 years, female
215.8
452_1
88 years, female
212.3
506_1
65 years, male
208.6
163_1
78 years, male
205.1
354_1
81 years, female
204.4
356_1
87 years, female
203.1
318_1
68 years, male
202.5
4_1
88 years, female
201.7
264_1
73 years, female
201.7
286_1
68 years, female
199.4
353_1
82 years, female
192.2
320_1
89 years, female
185.9
295_1
61 years, female
182.3
218_1
71 years, female
182.2
316_1
62 years, male
179.0
322_1
76 years, male
176.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.