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RPS13
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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1070.0 nTPM
GTEx:1070.0 nTPM
FANTOM5:479.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA005985
Squamous epithelial cells Low


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1070.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1070.0
Samples: 156

Max nTPM: 2332.5
Min nTPM: 650.3
Std nTPM: 260.8
Median nTPM: 1033.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2332.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2153.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1985.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1677.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1617.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1564.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1556.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1530.2
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1526.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1513.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1506.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1473.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1410.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1391.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1385.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1372.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1367.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 1356.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1324.4
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1313.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1297.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1286.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1273.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1255.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1252.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1251.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1247.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1238.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1236.7
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1230.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1227.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1224.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1223.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1222.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1219.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1203.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1199.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1198.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1198.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1197.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1189.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1184.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1180.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1180.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1169.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1167.1
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1156.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1156.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1145.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1143.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1143.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1142.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1140.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1139.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1138.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1128.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 1123.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1119.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1117.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1101.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1085.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1081.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1080.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1080.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1080.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1074.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1073.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1070.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1068.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1067.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1064.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1058.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1057.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1050.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1049.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1049.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1037.6
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1035.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1031.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1031.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1028.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1024.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1023.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1015.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1014.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1011.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1008.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1003.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 995.8
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 993.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 992.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 992.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 989.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 988.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 985.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 981.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 980.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 980.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 974.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 956.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 955.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 952.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 935.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 931.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 926.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 919.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 913.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 912.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 911.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 907.9
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 897.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 891.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 891.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 889.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 883.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 871.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 868.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 867.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 860.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 858.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 858.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 857.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 857.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 856.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 854.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 854.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 853.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 853.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 852.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 842.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 841.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 834.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 834.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 829.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 826.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 823.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 820.9
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 809.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 806.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 804.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 803.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 795.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 793.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 789.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 779.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 778.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 765.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 756.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 746.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 737.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 725.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 724.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 702.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 702.0
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 672.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 650.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 479.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 479.0
FF:10204-103F6 68 years, female 479.0

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