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ARPC3
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:184.0 nTPM
FANTOM5:213.4 Scaled Tags Per Million
Pig:110.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006550
Glial cells Medium
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 184.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 184.0
Samples: 246

Max nTPM: 372.4
Min nTPM: 106.5
Std nTPM: 45.4
Median nTPM: 175.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 372.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 345.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 337.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 327.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 326.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 319.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 297.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 292.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 286.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 279.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 274.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 272.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 264.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 261.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 261.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 259.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 259.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 258.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 254.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 253.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 252.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 249.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 245.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 243.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 242.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 241.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 240.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 238.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 237.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 236.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 236.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 235.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 235.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 235.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 233.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 232.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 228.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 228.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 226.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 225.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 225.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 225.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 224.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 223.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 223.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 222.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 221.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 218.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 218.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 213.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 211.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 209.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 208.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 207.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 207.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 207.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 206.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 205.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 205.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 203.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 203.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 203.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 203.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 203.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 201.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 199.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 199.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 198.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 198.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 198.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 197.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 197.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 196.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 196.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 196.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 195.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 195.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 195.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 193.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 193.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 192.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 192.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 192.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 192.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 192.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 192.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 192.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 192.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 191.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 191.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 190.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 190.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 190.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 190.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 189.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 188.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 187.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 187.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 187.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 186.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 186.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 186.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 186.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 186.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 185.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 184.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 184.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 183.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 183.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 183.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 182.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 182.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 182.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 181.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 180.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 180.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 179.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 179.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 176.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 176.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 175.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 175.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 175.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 175.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 175.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 174.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 174.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 174.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 173.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 173.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 173.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 173.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 173.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 171.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 171.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 170.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 170.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 170.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 169.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 168.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 168.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 168.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 168.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 168.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 167.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 167.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 167.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 167.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 166.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 166.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 166.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 165.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 165.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 165.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 164.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 163.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 163.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 163.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 163.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 163.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 163.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 162.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 162.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 161.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 161.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 161.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 161.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 160.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 160.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 160.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 158.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 158.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 156.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 156.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 156.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 154.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 154.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 154.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 152.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 152.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 151.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 151.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 151.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 151.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 151.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 151.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 151.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 150.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 149.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 149.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 149.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 149.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 146.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 146.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 145.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 145.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 145.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 145.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 144.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 142.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 142.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 142.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 141.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 139.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 139.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 139.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 139.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 139.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 138.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 138.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 137.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 137.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 136.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 136.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 136.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 135.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 133.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 133.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 132.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 132.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 132.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 132.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 131.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 131.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 131.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 129.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 129.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 128.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 128.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 128.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 127.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 125.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 125.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 124.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 124.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 124.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 123.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 122.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 122.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 117.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 114.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 114.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 106.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 213.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 213.4
FF:10164-103B2 76 years, female 213.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 110.0
Pig sample Sample description nTPM
Caudate
nTPM: 110.0
Samples: 4

Max nTPM: 131.8
Min nTPM: 100.1
Sample A Female 104.0
Sample B Female 104.1
Sample C Male 131.8
Sample D Male 100.1

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