PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:296.1 nTPM
HPA:296.1 nTPM
FANTOM5:228.3 Scaled Tags Per Million
Pig:58.6 nTPM
Mouse:217.9 nTPM
Allen mouse:4.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 296.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 241.5
2301 Female, age 85, both hemispheres 251.2
2090 Male, age 80, both hemispheres 245.1
1984 Male, age 76, both hemispheres 237.2
2188 Female, age 91, both hemispheres 232.5
Area postrema
nTPM: 296.1
2799 Male, age 61, both hemispheres 359.6
2306 Male, age 80, both hemispheres 272.3
2054 Male, age 76, both hemispheres 256.5
Cuneate nuclei
nTPM: 248.9
2376 Male, age 61, both hemispheres 259.8
2131 Male, age 76, both hemispheres 244.4
2381 Male, age 80, both hemispheres 242.4
Dorsal cochlear nucleus
nTPM: 255.1
2802 Male, age 74, right hemisphere 271.9
2378 Male, age 80, both hemispheres 258.3
2370 Male, age 61, both hemispheres 256.2
2058 Male, age 76, both hemispheres 253.2
2187 Female, age 91, both hemispheres 235.5
Dorsal medullary reticular nucleus
nTPM: 249.6
2373 Male, age 61, both hemispheres 265.2
2040 Female, age 85, both hemispheres 243.4
2088 Male, age 76, both hemispheres 240.2
Dorsal motor vagal complex
nTPM: 257.7
2797 Male, age 61, both hemispheres 348.4
2643 Male, age 74, both hemispheres 258.6
2185 Male, age 76, both hemispheres 258.5
2000 Male, age 74, unknown 253.3
2813 Female, age 72, unknown 239.9
2133 Female, age 91, both hemispheres 238.1
2807 Female, age 85, both hemispheres 233.1
2844 Male, age 55, unknown 231.3
Dorsal tegmental nucleus
nTPM: 246.1
1936 Male, age 76, left hemisphere 248.5
2358 Male, age 61, both hemispheres 247.6
2083 Male, age 80, both hemispheres 246.3
2326 Male, age 74, both hemispheres 241.8
Dorsolateral tegmental area
nTPM: 234.8
2654 Male, age 80, both hemispheres 251.8
2751 Female, age 85, both hemispheres 238.0
2360 Male, age 74, both hemispheres 232.6
2337 Male, age 61, both hemispheres 227.3
2141 Male, age 76, both hemispheres 224.2
Gigantocellular reticular nuclei, medullary
nTPM: 243.1
2314 Male, age 61, both hemispheres 283.9
1876 Female, age 85, both hemispheres 243.0
2387 Female, age 91, both hemispheres 238.6
2022 Male, age 76, right hemisphere 236.9
2462 Male, age 74, both hemispheres 231.4
2310 Male, age 80, both hemispheres 224.7
Gigantocellular reticular nuclei, pars
nTPM: 231.1
2084 Female, age 85, both hemispheres 240.7
2336 Male, age 61, both hemispheres 237.2
2330 Male, age 80, both hemispheres 229.6
2706 Male, age 80, both hemispheres 229.6
2168 Male, age 76, both hemispheres 218.3
Inferior olive
nTPM: 290.6
2563 Male, age 74, both hemispheres 308.2
2085 Female, age 85, both hemispheres 293.9
2178 Male, age 61, both hemispheres 293.6
2379 Male, age 80, both hemispheres 293.1
2628 Female, age 91, both hemispheres 264.3
Kolliker-Fuse nucleus
nTPM: 254.3
2315 Male, age 76, right hemisphere 299.9
2163 Male, age 80, both hemispheres 239.8
2793 Female, age 91, left hemisphere 223.2
Lateral lemniscal nuclei
nTPM: 218.0
2746 Female, age 85, left hemisphere 223.7
2169 Male, age 76, both hemispheres 222.6
2036 Male, age 80, both hemispheres 217.0
2453 Male, age 74, right hemisphere 214.3
2320 Female, age 91, left hemisphere 212.4
Lateral medullary reticular nucleus
nTPM: 265.5
2804 Female, age 91, both hemispheres 277.7
2374 Male, age 61, both hemispheres 274.0
2852 Male, age 80, both hemispheres 265.2
2190 Female, age 85, both hemispheres 263.0
2305 Male, age 74, both hemispheres 262.2
2044 Male, age 76, both hemispheres 251.1
Lateral parabrachial nucleus
nTPM: 255.0
2792 Male, age 76, both hemispheres 273.2
2013 Male, age 80, both hemispheres 252.9
2790 Male, age 61, both hemispheres 248.3
2139 Female, age 85, right hemisphere 245.6
Lateral vestibular nucleus
nTPM: 244.5
2311 Male, age 80, both hemispheres 249.4
2184 Male, age 76, both hemispheres 239.7
Locus coeruleus
nTPM: 229.3
2317 Female, age 72, unknown 236.2
1980 Male, age 76, both hemispheres 231.6
2123 Female, age 91, both hemispheres 230.5
2162 Male, age 80, both hemispheres 228.3
2014 Male, age 55, unknown 227.3
2788 Male, age 74, unknown 226.8
2720 Male, age 74, both hemispheres 224.5
Medial olivary nucleus
nTPM: 288.2
2138 Female, age 91, both hemispheres 306.1
1943 Male, age 61, both hemispheres 290.6
1962 Male, age 76, both hemispheres 288.0
2851 Male, age 80, both hemispheres 268.1
Medial parabrachial nucleus
nTPM: 235.0
2854 Male, age 80, both hemispheres 237.8
2156 Male, age 61, both hemispheres 237.4
2786 Male, age 76, both hemispheres 237.1
2170 Female, age 91, both hemispheres 233.8
2463 Female, age 85, right hemisphere 228.7
Medial periolivary nuclei
nTPM: 228.2
2791 Male, age 74, right hemisphere 240.0
2063 Male, age 76, both hemispheres 237.6
2081 Male, age 80, both hemispheres 226.7
2458 Female, age 91, both hemispheres 220.5
2171 Female, age 85, both hemispheres 215.9
Medial vestibular nucleus
nTPM: 241.9
2624 Male, age 61, both hemispheres 249.6
2134 Male, age 76, both hemispheres 244.8
2743 Female, age 85, both hemispheres 240.5
2801 Male, age 74, both hemispheres 240.0
2093 Male, age 80, both hemispheres 239.9
2803 Female, age 91, both hemispheres 236.3
Motor facial nucleus
nTPM: 229.6
2126 Male, age 61, both hemispheres 239.7
2795 Female, age 91, both hemispheres 237.2
2062 Male, age 76, both hemispheres 236.4
2365 Male, age 74, right hemisphere 230.2
2697 Female, age 85, both hemispheres 222.1
2327 Male, age 80, both hemispheres 212.0
Motor hypoglossal nucleus
nTPM: 243.5
2461 Male, age 61, both hemispheres 261.7
2277 Male, age 76, both hemispheres 248.7
2125 Female, age 91, both hemispheres 242.6
2132 Female, age 85, both hemispheres 233.3
2182 Male, age 80, both hemispheres 231.3
Motor trigeminal nucleus
nTPM: 223.6
2309 Male, age 76, both hemispheres 236.8
2335 Male, age 61, both hemispheres 225.1
2321 Female, age 91, both hemispheres 221.1
2560 Male, age 74, both hemispheres 220.4
2079 Male, age 80, both hemispheres 214.4
Nuclei of the trapezoid body
nTPM: 227.5
1983 Male, age 76, both hemispheres 246.7
2368 Female, age 91, both hemispheres 229.5
2166 Male, age 80, both hemispheres 227.3
2159 Male, age 61, both hemispheres 217.5
2735 Female, age 85, both hemispheres 216.6
Nucleus ambiguus
nTPM: 254.1
2071 Male, age 76, both hemispheres 291.4
2096 Female, age 85, both hemispheres 216.9
Nucleus cuneatus
nTPM: 260.9
2380 Male, age 80, both hemispheres 274.2
2564 Male, age 74, both hemispheres 269.0
2562 Male, age 61, both hemispheres 266.7
2100 Male, age 76, both hemispheres 253.0
2808 Female, age 85, both hemispheres 252.9
2805 Female, age 91, both hemispheres 249.6
Nucleus gracilis
nTPM: 255.7
2627 Male, age 74, both hemispheres 274.4
2382 Male, age 80, both hemispheres 247.2
2299 Female, age 85, both hemispheres 245.5
Nucleus raphe magnus
nTPM: 220.8
2051 Male, age 76, both hemispheres 240.6
2455 Male, age 74, both hemispheres 225.6
2328 Male, age 80, both hemispheres 221.6
2459 Female, age 91, both hemispheres 215.8
2160 Male, age 61, both hemispheres 214.6
2172 Female, age 85, both hemispheres 206.3
Nucleus raphe obscurus
nTPM: 267.6
2142 Male, age 76, midline 292.5
2845 Female, age 85, midline 257.9
2800 Male, age 61, midline 252.5
Nucleus raphe pallidus
nTPM: 264.5
1924 Male, age 61, midline 279.0
2145 Male, age 76, midline 276.8
2183 Male, age 80, midline 237.8
Nucleus tractus solitarii
nTPM: 244.5
2144 Female, age 91, right hemisphere 273.9
2191 Female, age 85, both hemispheres 246.3
2656 Male, age 76, both hemispheres 234.4
2307 Male, age 80, both hemispheres 223.5
Paramedian reticular nucleus
nTPM: 240.8
2052 Male, age 76, both hemispheres 248.8
2057 Male, age 80, both hemispheres 244.9
2313 Male, age 61, both hemispheres 242.5
2050 Female, age 85, both hemispheres 227.1
Parvicellular reticular nuclei
nTPM: 236.8
2119 Male, age 80, both hemispheres 252.7
2095 Male, age 76, both hemispheres 245.7
2558 Male, age 74, both hemispheres 211.8
Parvicellular reticular nuclei, medullary
nTPM: 233.5
2091 Female, age 85, both hemispheres 237.1
2181 Male, age 80, left hemisphere 232.6
2189 Female, age 91, both hemispheres 230.8
Peritrigeminal nucleus
nTPM: 264.1
2136 Male, age 76, both hemispheres 273.4
2067 Female, age 85, both hemispheres 273.1
2179 Male, age 61, both hemispheres 245.7
Pontine nuclei
nTPM: 223.6
2109 Female, age 72, unknown 236.4
1863 Male, age 55, unknown 235.8
1968 Male, age 76, left hemisphere 228.9
2115 Male, age 80, left hemisphere 228.3
2319 Female, age 91, both hemispheres 222.4
2454 Male, age 74, left hemisphere 215.6
2727 Male, age 61, right hemisphere 212.0
2787 Female, age 85, both hemispheres 209.7
Pontine raphe nucleus
nTPM: 224.5
2853 Male, age 76, midline 233.1
2122 Female, age 85, midline 215.9
Posteroventral cochlear nucleus
nTPM: 247.6
2371 Male, age 61, both hemispheres 261.5
2341 Male, age 80, both hemispheres 260.1
2070 Male, age 76, both hemispheres 243.3
2135 Female, age 91, both hemispheres 238.8
2752 Female, age 85, both hemispheres 234.5
Prepositus hypoglossal nucleus
nTPM: 251.6
2855 Female, age 85, right hemisphere 251.9
2086 Male, age 80, both hemispheres 251.3
Principal sensory trigeminal nucleus
nTPM: 223.9
2324 Male, age 76, both hemispheres 248.3
2158 Male, age 61, both hemispheres 216.8
2367 Female, age 91, left hemisphere 215.3
2008 Male, age 80, left hemisphere 215.1
Reticular pontine nucleus, caudal
nTPM: 224.7
2092 Male, age 76, both hemispheres 243.8
2559 Male, age 74, both hemispheres 226.4
2457 Female, age 91, both hemispheres 221.9
2332 Male, age 80, right hemisphere 206.6
Reticular pontine nucleus, oral
nTPM: 224.2
1939 Male, age 80, both hemispheres 241.6
2167 Male, age 76, both hemispheres 228.6
2012 Female, age 85, both hemispheres 224.0
2366 Female, age 91, both hemispheres 216.9
2361 Male, age 74, both hemispheres 210.1
Reticulotegmental nucleus
nTPM: 231.8
2322 Female, age 91, both hemispheres 236.8
2333 Male, age 80, both hemispheres 235.4
2452 Male, age 74, both hemispheres 230.9
2325 Male, age 76, both hemispheres 224.2
Spinal trigeminal nucleus, caudal
nTPM: 242.3
2447 Male, age 76, both hemispheres 250.4
2308 Male, age 80, both hemispheres 243.0
2312 Male, age 61, both hemispheres 242.8
2642 Male, age 74, both hemispheres 238.5
2390 Female, age 91, both hemispheres 236.9
Spinal trigeminal nucleus, interpolar
nTPM: 238.8
2625 Male, age 61, both hemispheres 249.4
2033 Male, age 80, both hemispheres 247.1
2066 Male, age 76, right hemisphere 242.0
2389 Female, age 91, both hemispheres 228.9
2386 Female, age 85, both hemispheres 226.9
Spinal trigeminal nucleus, oral
nTPM: 235.6
2164 Male, age 80, both hemispheres 238.0
1978 Male, age 76, both hemispheres 237.7
2737 Female, age 85, both hemispheres 231.2
Spinal vestibular nucleus
nTPM: 245.0
2384 Male, age 74, both hemispheres 251.9
2806 Female, age 85, both hemispheres 248.6
2748 Male, age 76, both hemispheres 245.8
2796 Male, age 61, both hemispheres 244.6
2780 Male, age 80, both hemispheres 242.8
2186 Female, age 91, both hemispheres 236.2
Subcoeruleus area
nTPM: 232.4
2369 Female, age 85, left hemisphere 242.2
2451 Male, age 74, both hemispheres 240.8
1958 Male, age 80, both hemispheres 235.3
2323 Female, age 91, left hemisphere 224.8
2089 Male, age 76, left hemisphere 218.9
Superior olive
nTPM: 227.1
2364 Male, age 74, right hemisphere 239.2
2020 Male, age 76, both hemispheres 235.1
2329 Male, age 80, right hemisphere 222.7
2561 Female, age 91, both hemispheres 219.4
1875 Female, age 85, both hemispheres 218.8
Superior vestibular nucleus
nTPM: 261.9
2383 Male, age 74, both hemispheres 266.6
2061 Male, age 76, both hemispheres 260.6
2015 Male, age 80, both hemispheres 258.6
Ventral medullary reticular nucleus
nTPM: 260.8
2372 Male, age 61, both hemispheres 285.9
2060 Male, age 76, both hemispheres 235.7
Ventral periolivary nuclei
nTPM: 225.8
2023 Male, age 76, both hemispheres 243.3
2165 Male, age 80, both hemispheres 226.4
2130 Female, age 85, both hemispheres 220.8
2794 Female, age 91, left hemisphere 212.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 259.6
2302 Female, age 91, both hemispheres 267.9
2180 Male, age 61, both hemispheres 267.7
1986 Male, age 76, both hemispheres 262.5
2118 Male, age 80, both hemispheres 251.8
2741 Female, age 85, both hemispheres 247.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 228.8
1959 Male, age 76, both hemispheres 239.4
2840 Female, age 85, both hemispheres 232.4
2456 Female, age 91, both hemispheres 228.8
2161 Male, age 80, both hemispheres 227.1
2359 Male, age 61, both hemispheres 224.7
2449 Male, age 74, both hemispheres 220.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 228.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 217.6
FF:10182-103D2 60 years, female 220.2
FF:10165-103B3 76 years, female 215.1
Medulla oblongata
Scaled Tags Per Million: 228.3
FF:10155-103A2 76 years, female 274.8
FF:10038-101F2 18-64 years, mixed 232.8
FF:10174-103C3 60 years, female 177.2
Pons
Scaled Tags Per Million: 135.1
FF:10033-101E6 18-54 years, mixed 135.1

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 58.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 58.6
Samples: 4

Max nTPM: 69.4
Min nTPM: 48.2
Sample A Female 48.2
Sample B Female 53.8
Sample C Male 62.9
Sample D Male 69.4
Pons
nTPM: 50.8
Samples: 4

Max nTPM: 68.5
Min nTPM: 34.3
Sample A Female 47.8
Sample B Female 34.3
Sample C Male 52.4
Sample D Male 68.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 217.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 217.9
Samples: 4

Max nTPM: 222.5
Min nTPM: 213.2
Sample A Male 214.5
Sample B Male 213.2
Sample C Female 221.4
Sample D Female 222.5

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.6
633273 Antisense, RP_040907_02_C08, Mouse strain C57BL/6J (56 days, male) 4.6
Pons
Expression energy: 4.1
633273 Antisense, RP_040907_02_C08, Mouse strain C57BL/6J (56 days, male) 4.1

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