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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:268.2 nTPM
FANTOM5:311.1 Scaled Tags Per Million
Pig:217.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB000063Antibody CAB073539
Glial cells HighNot detected
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 268.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 268.2
Samples: 246

Max nTPM: 609.0
Min nTPM: 63.7
Std nTPM: 120.0
Median nTPM: 269.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 609.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 601.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 585.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 537.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 518.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 511.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 489.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 485.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 482.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 479.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 476.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 473.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 473.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 469.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 468.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 466.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 465.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 457.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 456.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 452.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 451.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 451.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 450.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 441.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 440.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 436.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 434.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 429.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 429.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 422.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 421.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 420.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 419.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 416.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 410.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 408.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 408.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 408.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 403.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 393.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 386.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 384.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 383.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 382.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 381.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 381.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 375.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 369.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 367.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 367.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 366.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 366.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 365.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 360.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 359.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 357.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 355.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 352.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 350.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 349.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 349.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 346.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 345.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 344.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 341.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 340.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 340.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 339.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 339.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 337.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 336.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 335.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 335.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 334.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 333.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 333.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 330.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 329.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 325.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 322.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 319.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 315.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 314.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 314.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 312.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 312.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 312.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 312.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 311.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 311.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 309.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 309.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 307.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 305.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 304.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 304.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 300.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 299.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 298.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 298.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 297.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 296.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 295.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 295.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 293.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 293.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 291.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 290.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 289.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 288.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 288.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 286.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 284.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 283.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 282.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 280.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 278.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 277.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 276.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 274.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 271.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 271.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 271.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 267.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 265.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 262.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 261.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 258.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 257.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 256.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 255.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 254.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 251.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 249.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 248.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 246.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 245.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 245.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 244.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 242.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 239.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 237.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 235.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 234.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 232.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 232.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 232.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 230.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 225.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 225.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 224.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 222.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 221.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 221.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 213.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 213.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 213.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 211.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 210.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 205.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 204.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 203.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 201.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 200.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 192.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 192.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 192.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 191.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 191.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 190.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 189.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 189.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 186.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 185.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 184.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 183.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 182.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 181.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 181.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 180.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 179.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 175.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 170.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 169.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 165.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 161.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 160.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 160.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 160.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 155.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 149.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 149.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 147.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 146.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 144.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 140.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 138.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 133.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 132.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 132.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 131.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 130.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 129.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 128.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 127.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 125.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 125.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 124.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 124.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 123.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 123.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 120.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 120.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 119.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 117.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 117.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 116.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 115.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 113.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 112.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 112.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 111.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 111.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 110.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 109.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 107.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 106.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 105.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 103.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 102.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 102.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 101.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 98.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 96.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 95.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 94.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 85.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 85.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 75.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 63.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 311.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 311.1
FF:10164-103B2 76 years, female 311.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 217.9
Pig sample Sample description nTPM
Caudate
nTPM: 217.9
Samples: 4

Max nTPM: 266.5
Min nTPM: 162.3
Sample A Female 162.3
Sample B Female 231.9
Sample C Male 266.5
Sample D Male 210.8

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