HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:76.1 nTPM
HPA:76.1 nTPM
GTEx:63.0 nTPM
FANTOM5:49.6 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:52.3 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028774Antibody HPA028775
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.1
Sample id Sample description nTPM
Hippocampus
nTPM: 75.1
1898 Male, age 80, left hemisphere 77.9
2529 Female, age 94, left hemisphere 76.2
2621 Female, age 67, right hemisphere 75.8
1855 Male, age 76, left hemisphere 74.3
1911 Female, age 85, right hemisphere 73.7
2148 Female, age 91, left hemisphere 72.5
Dentate gyrus
nTPM: 73.6
2010 Male, age 76, both hemispheres 76.2
1927 Female, age 91, both hemispheres 74.3
2246 Female, age 85, both hemispheres 73.5
2530 Female, age 94, left hemisphere 73.3
2528 Male, age 74, both hemispheres 73.1
2531 Female, age 67, both hemispheres 70.9
Entorhinal gyrus
nTPM: 73.3
1938 Female, age 85, left hemisphere 75.9
2764 Male, age 80, right hemisphere 75.1
1787 Male, age 76, left hemisphere 74.6
2117 Female, age 91, right hemisphere 74.4
2613 Female, age 94, left hemisphere 70.4
2686 Male, age 75, right hemisphere 69.7
Hippocampus, CA1
nTPM: 76.0
2749 Male, age 80, left hemisphere 82.8
2527 Male, age 74, both hemispheres 75.7
2045 Male, age 76, both hemispheres 74.8
1873 Female, age 85, both hemispheres 74.4
2082 Female, age 91, right hemisphere 72.3
Hippocampus, CA2
nTPM: 76.1
2249 Male, age 74, both hemispheres 78.5
1892 Male, age 76, both hemispheres 78.4
1963 Male, age 80, left hemisphere 76.6
2437 Female, age 94, left hemisphere 76.1
1940 Female, age 85, left hemisphere 74.4
2113 Female, age 91, right hemisphere 72.5
Hippocampus, CA3
nTPM: 75.2
2137 Male, age 80, left hemisphere 79.6
1867 Male, age 76, both hemispheres 78.6
2436 Male, age 74, both hemispheres 75.6
1891 Female, age 85, both hemispheres 74.2
2620 Female, age 94, left hemisphere 73.4
2861 Female, age 67, both hemispheres 70.0
Parahippocampal cortex
nTPM: 74.0
1850 Male, age 80, both hemispheres 76.3
2245 Female, age 91, both hemispheres 75.7
2018 Male, age 76, both hemispheres 75.5
1990 Female, age 91, right hemisphere 75.4
2250 Female, age 67, right hemisphere 75.3
1933 Female, age 85, both hemispheres 73.9
2532 Female, age 72, left hemisphere 73.9
2622 Female, age 67, right hemisphere 71.8
2693 Female, age 94, both hemispheres 71.2
2692 Male, age 74, both hemispheres 70.7
Perirhinal gyrus
nTPM: 75.6
1841 Female, age 85, right hemisphere 78.2
1794 Male, age 80, right hemisphere 76.6
1847 Female, age 91, left hemisphere 76.4
2521 Female, age 94, right hemisphere 74.7
2848 Male, age 76, right hemisphere 72.1
Subiculum
nTPM: 75.8
2042 Male, age 76, both hemispheres 78.6
1977 Female, age 85, both hemispheres 76.7
2438 Female, age 94, left hemisphere 76.2
1901 Male, age 80, both hemispheres 76.0
2619 Male, age 74, both hemispheres 74.1
2729 Female, age 91, right hemisphere 73.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.0
Samples: 197

Max nTPM: 180.7
Min nTPM: 27.6
Std nTPM: 22.1
Median nTPM: 58.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 180.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 170.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 145.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 143.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 132.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 130.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 126.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 119.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 116.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 106.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 106.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.6
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 40.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 34.6
Min nTPM: 20.6
Sample A Female 34.6
Sample B Female 26.0
Sample C Male 22.4
Sample D Male 20.6
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 30.0
Min nTPM: 18.5
Sample A Female 20.3
Sample B Female 30.0
Sample C Male 20.3
Sample D Male 18.5
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 28.7
Min nTPM: 18.3
Sample A Female 28.7
Sample B Female 22.7
Sample C Male 18.3
Sample D Male 19.5
Ventral hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 27.1
Min nTPM: 18.7
Sample A Female 22.1
Sample B Female 18.7
Sample C Male 25.7
Sample D Male 27.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.3
Samples: 4

Max nTPM: 49.5
Min nTPM: 43.9
Sample A Male 47.2
Sample B Male 48.4
Sample C Female 49.5
Sample D Female 43.9
Hippocampal formation
nTPM: 52.3
Samples: 4

Max nTPM: 54.2
Min nTPM: 50.5
Sample A Male 51.6
Sample B Male 52.9
Sample C Female 54.2
Sample D Female 50.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68269748 Antisense, RP_041129_02_B02, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.