HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		23.823
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:211.1 nTPM
HPA:211.1 nTPM
GTEx:159.7 nTPM
FANTOM5:656.6 Scaled Tags Per Million
Pig:303.7 nTPM
Mouse:111.2 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019123Antibody CAB022602
Glial cells MediumHigh
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA019123
Hippocampal formation mean intensity 23.823
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 5.477
Molecular layer of the dentate gyrus 5.945
Granular dentate gyrus 18.680
CA1 - oriens layer 5.017
CA1 - pyramidal layer 16.951
CA1 - radiatum layer 3.102
CA2 - oriens layer 2.947
CA2 - pyramidal layer 16.461
CA2 - radiatum layer 1.191
CA3 - oriens layer 5.779
CA3 - pyramidal layer 23.823
CA3 - radiatum layer 1.418
Stratum lucidum 4.939
Lacunosum moleculare 7.842
Subiculum 15.931

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 211.1
Sample id Sample description nTPM
Hippocampus
nTPM: 164.0
2529 Female, age 94, left hemisphere 206.1
1911 Female, age 85, right hemisphere 198.1
1855 Male, age 76, left hemisphere 168.3
2621 Female, age 67, right hemisphere 144.8
1898 Male, age 80, left hemisphere 138.1
2148 Female, age 91, left hemisphere 128.5
Dentate gyrus
nTPM: 127.4
2530 Female, age 94, left hemisphere 187.7
2010 Male, age 76, both hemispheres 162.0
2246 Female, age 85, both hemispheres 139.3
2528 Male, age 74, both hemispheres 129.3
2531 Female, age 67, both hemispheres 77.4
1927 Female, age 91, both hemispheres 68.6
Entorhinal gyrus
nTPM: 148.2
2117 Female, age 91, right hemisphere 282.2
2686 Male, age 75, right hemisphere 145.8
2764 Male, age 80, right hemisphere 135.3
1938 Female, age 85, left hemisphere 135.0
1787 Male, age 76, left hemisphere 111.1
2613 Female, age 94, left hemisphere 79.9
Hippocampus, CA1
nTPM: 120.5
2527 Male, age 74, both hemispheres 176.9
1873 Female, age 85, both hemispheres 144.4
2082 Female, age 91, right hemisphere 121.3
2045 Male, age 76, both hemispheres 93.8
2749 Male, age 80, left hemisphere 66.0
Hippocampus, CA2
nTPM: 141.1
1963 Male, age 80, left hemisphere 167.2
2249 Male, age 74, both hemispheres 163.6
2113 Female, age 91, right hemisphere 154.4
2437 Female, age 94, left hemisphere 148.4
1940 Female, age 85, left hemisphere 142.2
1892 Male, age 76, both hemispheres 70.7
Hippocampus, CA3
nTPM: 100.7
1891 Female, age 85, both hemispheres 239.1
1867 Male, age 76, both hemispheres 113.7
2436 Male, age 74, both hemispheres 90.7
2137 Male, age 80, left hemisphere 59.5
2861 Female, age 67, both hemispheres 51.2
2620 Female, age 94, left hemisphere 49.7
Parahippocampal cortex
nTPM: 131.9
2692 Male, age 74, both hemispheres 206.4
2018 Male, age 76, both hemispheres 160.2
2532 Female, age 72, left hemisphere 150.2
1990 Female, age 91, right hemisphere 137.1
1933 Female, age 85, both hemispheres 134.9
1850 Male, age 80, both hemispheres 130.4
2245 Female, age 91, both hemispheres 120.9
2693 Female, age 94, both hemispheres 109.9
2250 Female, age 67, right hemisphere 106.0
2622 Female, age 67, right hemisphere 62.9
Perirhinal gyrus
nTPM: 78.3
2521 Female, age 94, right hemisphere 101.8
2848 Male, age 76, right hemisphere 81.3
1794 Male, age 80, right hemisphere 75.8
1847 Female, age 91, left hemisphere 70.1
1841 Female, age 85, right hemisphere 62.6
Subiculum
nTPM: 211.1
2042 Male, age 76, both hemispheres 286.7
1901 Male, age 80, both hemispheres 259.0
2438 Female, age 94, left hemisphere 212.3
1977 Female, age 85, both hemispheres 178.8
2619 Male, age 74, both hemispheres 169.1
2729 Female, age 91, right hemisphere 160.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 159.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 159.7
Samples: 197

Max nTPM: 364.3
Min nTPM: 54.3
Std nTPM: 67.4
Median nTPM: 143.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 364.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 361.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 353.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 321.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 321.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 319.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 313.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 303.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 302.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 299.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 295.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 656.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 656.6
FF:10153-102I9 76 years, female 920.8
FF:10169-103B7 60 years, female 392.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 303.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 303.7
Samples: 4

Max nTPM: 397.4
Min nTPM: 201.4
Sample A Female 397.4
Sample B Female 242.3
Sample C Male 373.7
Sample D Male 201.4
Entorhinal cortex
nTPM: 222.4
Samples: 4

Max nTPM: 251.5
Min nTPM: 201.6
Sample A Female 205.0
Sample B Female 251.5
Sample C Male 231.5
Sample D Male 201.6
Subiculum
nTPM: 263.8
Samples: 4

Max nTPM: 294.3
Min nTPM: 240.5
Sample A Female 294.3
Sample B Female 266.9
Sample C Male 240.5
Sample D Male 253.5
Ventral hippocampus
nTPM: 259.7
Samples: 4

Max nTPM: 298.1
Min nTPM: 228.0
Sample A Female 298.1
Sample B Female 236.7
Sample C Male 228.0
Sample D Male 276.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 111.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 101.5
Samples: 4

Max nTPM: 121.1
Min nTPM: 88.4
Sample A Male 121.1
Sample B Male 96.8
Sample C Female 99.8
Sample D Female 88.4
Hippocampal formation
nTPM: 111.3
Samples: 4

Max nTPM: 130.9
Min nTPM: 101.2
Sample A Male 101.2
Sample B Male 110.1
Sample C Female 130.9
Sample D Female 102.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
1151 Antisense, RP_Baylor_102604, Mouse strain C57BL/6J (56 days, male) 14.9
68797858 Antisense, RP_050215_01_C08, Mouse strain C57BL/6J (56 days, male) 12.3
73635471 Antisense, RP_051130_02_F07, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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