HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.1 nTPM
HPA:33.1 nTPM
GTEx:24.1 nTPM
FANTOM5:71.0 Scaled Tags Per Million
Pig:53.2 nTPM
Mouse:62.3 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029045Antibody HPA029046
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.5
1898 Male, age 80, left hemisphere 28.4
2621 Female, age 67, right hemisphere 26.8
2148 Female, age 91, left hemisphere 24.5
1855 Male, age 76, left hemisphere 23.8
2529 Female, age 94, left hemisphere 22.8
1911 Female, age 85, right hemisphere 21.1
Dentate gyrus
nTPM: 24.7
1927 Female, age 91, both hemispheres 29.9
2530 Female, age 94, left hemisphere 25.8
2010 Male, age 76, both hemispheres 23.7
2531 Female, age 67, both hemispheres 23.4
2246 Female, age 85, both hemispheres 23.1
2528 Male, age 74, both hemispheres 22.3
Entorhinal gyrus
nTPM: 27.7
2613 Female, age 94, left hemisphere 33.4
2764 Male, age 80, right hemisphere 30.0
1938 Female, age 85, left hemisphere 28.4
1787 Male, age 76, left hemisphere 27.8
2686 Male, age 75, right hemisphere 24.9
2117 Female, age 91, right hemisphere 21.9
Hippocampus, CA1
nTPM: 26.2
2749 Male, age 80, left hemisphere 34.2
2045 Male, age 76, both hemispheres 25.0
1873 Female, age 85, both hemispheres 24.7
2527 Male, age 74, both hemispheres 24.6
2082 Female, age 91, right hemisphere 22.5
Hippocampus, CA2
nTPM: 25.3
1892 Male, age 76, both hemispheres 31.0
1963 Male, age 80, left hemisphere 26.8
2437 Female, age 94, left hemisphere 26.8
1940 Female, age 85, left hemisphere 23.7
2249 Male, age 74, both hemispheres 22.9
2113 Female, age 91, right hemisphere 20.6
Hippocampus, CA3
nTPM: 27.3
2137 Male, age 80, left hemisphere 30.6
2620 Female, age 94, left hemisphere 30.5
2861 Female, age 67, both hemispheres 28.4
1867 Male, age 76, both hemispheres 26.5
2436 Male, age 74, both hemispheres 25.3
1891 Female, age 85, both hemispheres 22.7
Parahippocampal cortex
nTPM: 27.3
1850 Male, age 80, both hemispheres 31.6
2693 Female, age 94, both hemispheres 30.8
2245 Female, age 91, both hemispheres 28.7
1933 Female, age 85, both hemispheres 28.3
2622 Female, age 67, right hemisphere 27.5
1990 Female, age 91, right hemisphere 26.5
2532 Female, age 72, left hemisphere 25.5
2692 Male, age 74, both hemispheres 25.4
2250 Female, age 67, right hemisphere 25.0
2018 Male, age 76, both hemispheres 23.4
Perirhinal gyrus
nTPM: 33.1
1847 Female, age 91, left hemisphere 37.9
1794 Male, age 80, right hemisphere 34.7
1841 Female, age 85, right hemisphere 32.1
2521 Female, age 94, right hemisphere 32.1
2848 Male, age 76, right hemisphere 28.5
Subiculum
nTPM: 24.6
2438 Female, age 94, left hemisphere 28.4
2619 Male, age 74, both hemispheres 27.0
1901 Male, age 80, both hemispheres 26.4
1977 Female, age 85, both hemispheres 24.9
2729 Female, age 91, right hemisphere 20.8
2042 Male, age 76, both hemispheres 20.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.1
Samples: 197

Max nTPM: 45.6
Min nTPM: 6.3
Std nTPM: 7.7
Median nTPM: 22.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 45.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 43.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 41.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 40.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 38.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 38.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 37.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 37.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.0
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 58.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.2
Samples: 4

Max nTPM: 68.1
Min nTPM: 41.0
Sample A Female 68.1
Sample B Female 54.3
Sample C Male 49.4
Sample D Male 41.0
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 54.3
Min nTPM: 38.9
Sample A Female 54.3
Sample B Female 47.7
Sample C Male 45.6
Sample D Male 38.9
Subiculum
nTPM: 46.8
Samples: 4

Max nTPM: 64.2
Min nTPM: 37.5
Sample A Female 64.2
Sample B Female 39.1
Sample C Male 46.2
Sample D Male 37.5
Ventral hippocampus
nTPM: 52.5
Samples: 4

Max nTPM: 67.5
Min nTPM: 32.6
Sample A Female 56.5
Sample B Female 32.6
Sample C Male 67.5
Sample D Male 53.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.8
Samples: 4

Max nTPM: 65.1
Min nTPM: 54.5
Sample A Male 56.8
Sample B Male 54.5
Sample C Female 58.9
Sample D Female 65.1
Hippocampal formation
nTPM: 62.3
Samples: 4

Max nTPM: 65.9
Min nTPM: 61.0
Sample A Male 61.0
Sample B Male 61.2
Sample C Female 65.9
Sample D Female 61.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
74059351 Antisense, RP_051214_02_C05, Mouse strain C57BL/6J (56 days, male) 6.5
74047908 Antisense, RP_051214_02_C05, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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