HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:67.2 nTPM
HPA:67.2 nTPM
GTEx:63.0 nTPM
FANTOM5:298.8 Scaled Tags Per Million
Pig:86.0 nTPM
Mouse:297.5 nTPM
Allen mouse:20.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014561
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.2
Sample id Sample description nTPM
Hippocampus
nTPM: 58.6
1898 Male, age 80, left hemisphere 77.6
1855 Male, age 76, left hemisphere 58.8
1911 Female, age 85, right hemisphere 57.0
2621 Female, age 67, right hemisphere 54.2
2529 Female, age 94, left hemisphere 53.4
2148 Female, age 91, left hemisphere 50.8
Dentate gyrus
nTPM: 59.3
1927 Female, age 91, both hemispheres 70.9
2010 Male, age 76, both hemispheres 69.0
2528 Male, age 74, both hemispheres 59.3
2530 Female, age 94, left hemisphere 57.4
2246 Female, age 85, both hemispheres 53.4
2531 Female, age 67, both hemispheres 45.8
Entorhinal gyrus
nTPM: 54.6
1938 Female, age 85, left hemisphere 63.5
2764 Male, age 80, right hemisphere 58.8
2117 Female, age 91, right hemisphere 56.3
1787 Male, age 76, left hemisphere 54.8
2613 Female, age 94, left hemisphere 52.2
2686 Male, age 75, right hemisphere 42.0
Hippocampus, CA1
nTPM: 67.2
2749 Male, age 80, left hemisphere 88.9
1873 Female, age 85, both hemispheres 66.9
2045 Male, age 76, both hemispheres 62.9
2527 Male, age 74, both hemispheres 60.3
2082 Female, age 91, right hemisphere 56.8
Hippocampus, CA2
nTPM: 64.1
1892 Male, age 76, both hemispheres 84.8
1963 Male, age 80, left hemisphere 70.8
2249 Male, age 74, both hemispheres 68.5
1940 Female, age 85, left hemisphere 57.1
2113 Female, age 91, right hemisphere 54.0
2437 Female, age 94, left hemisphere 49.5
Hippocampus, CA3
nTPM: 61.3
2137 Male, age 80, left hemisphere 76.4
1867 Male, age 76, both hemispheres 74.7
2436 Male, age 74, both hemispheres 62.6
1891 Female, age 85, both hemispheres 58.7
2620 Female, age 94, left hemisphere 51.3
2861 Female, age 67, both hemispheres 44.1
Parahippocampal cortex
nTPM: 55.2
1850 Male, age 80, both hemispheres 69.5
1990 Female, age 91, right hemisphere 62.6
1933 Female, age 85, both hemispheres 62.4
2018 Male, age 76, both hemispheres 59.5
2250 Female, age 67, right hemisphere 58.6
2245 Female, age 91, both hemispheres 53.0
2693 Female, age 94, both hemispheres 52.8
2532 Female, age 72, left hemisphere 49.8
2692 Male, age 74, both hemispheres 46.8
2622 Female, age 67, right hemisphere 36.7
Perirhinal gyrus
nTPM: 65.8
1847 Female, age 91, left hemisphere 78.2
1841 Female, age 85, right hemisphere 69.3
1794 Male, age 80, right hemisphere 62.9
2521 Female, age 94, right hemisphere 61.8
2848 Male, age 76, right hemisphere 56.8
Subiculum
nTPM: 56.0
1901 Male, age 80, both hemispheres 67.3
1977 Female, age 85, both hemispheres 62.0
2042 Male, age 76, both hemispheres 55.9
2729 Female, age 91, right hemisphere 55.4
2438 Female, age 94, left hemisphere 49.8
2619 Male, age 74, both hemispheres 45.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.0
Samples: 197

Max nTPM: 113.2
Min nTPM: 30.1
Std nTPM: 13.3
Median nTPM: 61.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 113.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 111.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 110.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 100.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 93.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 89.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 88.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 87.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 87.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 87.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 86.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 298.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 298.8
FF:10169-103B7 60 years, female 325.4
FF:10153-102I9 76 years, female 272.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.0
Samples: 4

Max nTPM: 97.1
Min nTPM: 75.6
Sample A Female 97.1
Sample B Female 91.1
Sample C Male 80.1
Sample D Male 75.6
Entorhinal cortex
nTPM: 81.0
Samples: 4

Max nTPM: 91.3
Min nTPM: 74.6
Sample A Female 75.3
Sample B Female 91.3
Sample C Male 82.7
Sample D Male 74.6
Subiculum
nTPM: 74.2
Samples: 4

Max nTPM: 79.9
Min nTPM: 67.2
Sample A Female 79.9
Sample B Female 67.2
Sample C Male 72.8
Sample D Male 76.7
Ventral hippocampus
nTPM: 79.0
Samples: 4

Max nTPM: 87.7
Min nTPM: 66.3
Sample A Female 87.7
Sample B Female 66.3
Sample C Male 79.1
Sample D Male 82.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 297.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 291.0
Samples: 4

Max nTPM: 311.9
Min nTPM: 274.6
Sample A Male 274.6
Sample B Male 311.9
Sample C Female 280.8
Sample D Female 296.7
Hippocampal formation
nTPM: 297.5
Samples: 4

Max nTPM: 334.9
Min nTPM: 269.2
Sample A Male 334.9
Sample B Male 289.6
Sample C Female 296.3
Sample D Female 269.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.2
70429214 Antisense, RP_050614_01_C04, Mouse strain C57BL/6J (56 days, male) 20.9
81600550 Antisense, RP_080402_04_A11, Mouse strain C57BL/6J (56 days, male) 19.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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