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TMEM30A
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:63.3 nTPM
HPA:63.3 nTPM
FANTOM5:238.9 Scaled Tags Per Million
Pig:68.8 nTPM
Allen mouse:13.2 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 63.3
Sample id Sample description nTPM
Area postrema
nTPM: 52.6
2799 Male, age 61, both hemispheres 55.2
2054 Male, age 76, both hemispheres 54.1
2306 Male, age 80, both hemispheres 48.4
Cuneate nuclei
nTPM: 50.4
2376 Male, age 61, both hemispheres 54.3
2131 Male, age 76, both hemispheres 49.8
2381 Male, age 80, both hemispheres 47.2
Dorsal medullary reticular nucleus
nTPM: 55.7
2040 Female, age 85, both hemispheres 70.9
2373 Male, age 61, both hemispheres 51.9
2088 Male, age 76, both hemispheres 44.4
Dorsal motor vagal complex
nTPM: 51.7
2133 Female, age 91, both hemispheres 61.8
2000 Male, age 74, unknown 61.4
2844 Male, age 55, unknown 58.5
2813 Female, age 72, unknown 53.2
2797 Male, age 61, both hemispheres 48.2
2643 Male, age 74, both hemispheres 44.7
2185 Male, age 76, both hemispheres 43.4
2807 Female, age 85, both hemispheres 42.5
Gigantocellular reticular nuclei, medullary
nTPM: 56.6
1876 Female, age 85, both hemispheres 66.2
2387 Female, age 91, both hemispheres 58.3
2462 Male, age 74, both hemispheres 57.5
2022 Male, age 76, right hemisphere 57.1
2314 Male, age 61, both hemispheres 52.8
2310 Male, age 80, both hemispheres 47.9
Gigantocellular reticular nuclei, pars
nTPM: 51.6
2084 Female, age 85, both hemispheres 58.6
2168 Male, age 76, both hemispheres 58.2
2336 Male, age 61, both hemispheres 53.7
2706 Male, age 80, both hemispheres 44.0
2330 Male, age 80, both hemispheres 43.4
Inferior olive
nTPM: 54.6
2563 Male, age 74, both hemispheres 66.0
2085 Female, age 85, both hemispheres 59.1
2178 Male, age 61, both hemispheres 52.9
2379 Male, age 80, both hemispheres 51.0
2628 Female, age 91, both hemispheres 44.3
Lateral medullary reticular nucleus
nTPM: 58.4
2305 Male, age 74, both hemispheres 75.7
2044 Male, age 76, both hemispheres 62.6
2190 Female, age 85, both hemispheres 56.3
2804 Female, age 91, both hemispheres 54.9
2852 Male, age 80, both hemispheres 51.5
2374 Male, age 61, both hemispheres 49.4
Medial vestibular nucleus
nTPM: 57.6
2801 Male, age 74, both hemispheres 63.5
2093 Male, age 80, both hemispheres 60.6
2134 Male, age 76, both hemispheres 59.5
2803 Female, age 91, both hemispheres 58.6
2743 Female, age 85, both hemispheres 57.5
2624 Male, age 61, both hemispheres 45.6
Motor hypoglossal nucleus
nTPM: 55.0
2125 Female, age 91, both hemispheres 63.8
2132 Female, age 85, both hemispheres 60.7
2461 Male, age 61, both hemispheres 55.2
2277 Male, age 76, both hemispheres 50.3
2182 Male, age 80, both hemispheres 44.8
Nucleus ambiguus
nTPM: 48.7
2071 Male, age 76, both hemispheres 58.8
2096 Female, age 85, both hemispheres 38.6
Nucleus cuneatus
nTPM: 48.6
2380 Male, age 80, both hemispheres 54.1
2564 Male, age 74, both hemispheres 53.1
2562 Male, age 61, both hemispheres 50.9
2808 Female, age 85, both hemispheres 47.7
2100 Male, age 76, both hemispheres 43.9
2805 Female, age 91, both hemispheres 41.9
Nucleus gracilis
nTPM: 49.2
2627 Male, age 74, both hemispheres 54.6
2382 Male, age 80, both hemispheres 50.2
2299 Female, age 85, both hemispheres 42.6
Nucleus raphe magnus
nTPM: 56.8
2160 Male, age 61, both hemispheres 65.3
2455 Male, age 74, both hemispheres 61.1
2051 Male, age 76, both hemispheres 58.6
2172 Female, age 85, both hemispheres 55.0
2328 Male, age 80, both hemispheres 51.4
2459 Female, age 91, both hemispheres 49.7
Nucleus raphe obscurus
nTPM: 55.2
2845 Female, age 85, midline 59.8
2800 Male, age 61, midline 53.6
2142 Male, age 76, midline 52.1
Nucleus raphe pallidus
nTPM: 57.3
1924 Male, age 61, midline 61.1
2183 Male, age 80, midline 57.5
2145 Male, age 76, midline 53.4
Nucleus tractus solitarii
nTPM: 51.9
2144 Female, age 91, right hemisphere 70.8
2656 Male, age 76, both hemispheres 53.5
2191 Female, age 85, both hemispheres 44.9
2307 Male, age 80, both hemispheres 38.3
Parvicellular reticular nuclei
nTPM: 53.3
2119 Male, age 80, both hemispheres 60.4
2095 Male, age 76, both hemispheres 54.9
2558 Male, age 74, both hemispheres 44.7
Parvicellular reticular nuclei, medullary
nTPM: 57.6
2091 Female, age 85, both hemispheres 61.0
2189 Female, age 91, both hemispheres 59.8
2181 Male, age 80, left hemisphere 52.0
Peritrigeminal nucleus
nTPM: 58.2
2067 Female, age 85, both hemispheres 62.2
2136 Male, age 76, both hemispheres 57.4
2179 Male, age 61, both hemispheres 55.0
Prepositus hypoglossal nucleus
nTPM: 56.6
2855 Female, age 85, right hemisphere 63.3
2086 Male, age 80, both hemispheres 50.0
Spinal trigeminal nucleus, caudal
nTPM: 53.0
2390 Female, age 91, both hemispheres 65.5
2447 Male, age 76, both hemispheres 53.8
2312 Male, age 61, both hemispheres 52.1
2308 Male, age 80, both hemispheres 48.4
2642 Male, age 74, both hemispheres 44.9
Spinal trigeminal nucleus, interpolar
nTPM: 63.3
2066 Male, age 76, right hemisphere 66.6
2625 Male, age 61, both hemispheres 65.4
2033 Male, age 80, both hemispheres 64.9
2386 Female, age 85, both hemispheres 63.3
2389 Female, age 91, both hemispheres 56.2
Spinal vestibular nucleus
nTPM: 57.7
2186 Female, age 91, both hemispheres 61.0
2384 Male, age 74, both hemispheres 60.2
2780 Male, age 80, both hemispheres 60.2
2806 Female, age 85, both hemispheres 59.4
2748 Male, age 76, both hemispheres 56.2
2796 Male, age 61, both hemispheres 49.3
Ventral medullary reticular nucleus
nTPM: 57.5
2372 Male, age 61, both hemispheres 60.7
2060 Male, age 76, both hemispheres 54.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 57.4
2741 Female, age 85, both hemispheres 62.3
2180 Male, age 61, both hemispheres 58.7
1986 Male, age 76, both hemispheres 57.5
2118 Male, age 80, both hemispheres 54.8
2302 Female, age 91, both hemispheres 53.7

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 238.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 238.9
FF:10155-103A2 76 years, female 261.3
FF:10038-101F2 18-64 years, mixed 255.8
FF:10174-103C3 60 years, female 199.6

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 68.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 68.8
Samples: 4

Max nTPM: 72.1
Min nTPM: 67.1
Sample A Female 72.1
Sample B Female 67.1
Sample C Male 68.4
Sample D Male 67.5

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.2
70429214 Antisense, RP_050614_01_C04, Mouse strain C57BL/6J (56 days, male) 13.6
81600550 Antisense, RP_080402_04_A11, Mouse strain C57BL/6J (56 days, male) 12.8

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