HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:133.0 nTPM
HPA:133.0 nTPM
GTEx:102.9 nTPM
FANTOM5:103.8 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:68.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 133.0
Sample id Sample description nTPM
Hippocampus
nTPM: 133.0
2529 Female, age 94, left hemisphere 136.0
1911 Female, age 85, right hemisphere 134.6
1855 Male, age 76, left hemisphere 133.8
1898 Male, age 80, left hemisphere 133.0
2148 Female, age 91, left hemisphere 131.6
2621 Female, age 67, right hemisphere 129.3
Dentate gyrus
nTPM: 129.8
2010 Male, age 76, both hemispheres 135.8
2528 Male, age 74, both hemispheres 132.2
2246 Female, age 85, both hemispheres 130.2
1927 Female, age 91, both hemispheres 127.7
2530 Female, age 94, left hemisphere 127.7
2531 Female, age 67, both hemispheres 125.2
Entorhinal gyrus
nTPM: 128.1
2117 Female, age 91, right hemisphere 137.8
1787 Male, age 76, left hemisphere 129.1
1938 Female, age 85, left hemisphere 128.7
2764 Male, age 80, right hemisphere 126.8
2686 Male, age 75, right hemisphere 125.0
2613 Female, age 94, left hemisphere 121.0
Hippocampus, CA1
nTPM: 131.3
2527 Male, age 74, both hemispheres 134.1
2045 Male, age 76, both hemispheres 132.7
1873 Female, age 85, both hemispheres 131.5
2082 Female, age 91, right hemisphere 130.3
2749 Male, age 80, left hemisphere 127.9
Hippocampus, CA2
nTPM: 131.7
2249 Male, age 74, both hemispheres 138.5
1940 Female, age 85, left hemisphere 134.4
2113 Female, age 91, right hemisphere 131.8
1963 Male, age 80, left hemisphere 130.5
1892 Male, age 76, both hemispheres 127.9
2437 Female, age 94, left hemisphere 127.5
Hippocampus, CA3
nTPM: 131.4
2436 Male, age 74, both hemispheres 142.1
1867 Male, age 76, both hemispheres 133.2
1891 Female, age 85, both hemispheres 133.1
2137 Male, age 80, left hemisphere 128.9
2620 Female, age 94, left hemisphere 126.6
2861 Female, age 67, both hemispheres 124.6
Parahippocampal cortex
nTPM: 129.4
2018 Male, age 76, both hemispheres 138.9
2250 Female, age 67, right hemisphere 129.9
2692 Male, age 74, both hemispheres 129.8
2532 Female, age 72, left hemisphere 129.6
1990 Female, age 91, right hemisphere 129.3
2245 Female, age 91, both hemispheres 128.7
1850 Male, age 80, both hemispheres 128.2
1933 Female, age 85, both hemispheres 127.5
2693 Female, age 94, both hemispheres 127.3
2622 Female, age 67, right hemisphere 124.8
Perirhinal gyrus
nTPM: 127.6
1847 Female, age 91, left hemisphere 128.6
2521 Female, age 94, right hemisphere 128.3
1841 Female, age 85, right hemisphere 127.8
1794 Male, age 80, right hemisphere 127.2
2848 Male, age 76, right hemisphere 126.0
Subiculum
nTPM: 131.9
2042 Male, age 76, both hemispheres 137.3
2729 Female, age 91, right hemisphere 133.0
2619 Male, age 74, both hemispheres 132.9
1901 Male, age 80, both hemispheres 130.7
1977 Female, age 85, both hemispheres 129.8
2438 Female, age 94, left hemisphere 127.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 102.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 102.9
Samples: 197

Max nTPM: 200.1
Min nTPM: 49.5
Std nTPM: 26.0
Median nTPM: 101.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 200.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 189.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 158.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 158.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 156.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 156.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 154.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 154.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 154.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 154.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 153.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.8
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 103.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 21.8
Min nTPM: 13.2
Sample A Female 21.8
Sample B Female 15.9
Sample C Male 21.3
Sample D Male 13.2
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 17.2
Min nTPM: 11.4
Sample A Female 15.0
Sample B Female 17.2
Sample C Male 17.1
Sample D Male 11.4
Subiculum
nTPM: 17.2
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.1
Sample A Female 18.8
Sample B Female 15.2
Sample C Male 14.1
Sample D Male 20.7
Ventral hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 18.3
Min nTPM: 13.6
Sample A Female 16.2
Sample B Female 13.6
Sample C Male 18.3
Sample D Male 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 62.4
Min nTPM: 47.0
Sample A Male 52.5
Sample B Male 54.6
Sample C Female 62.4
Sample D Female 47.0
Hippocampal formation
nTPM: 68.6
Samples: 4

Max nTPM: 85.6
Min nTPM: 53.6
Sample A Male 58.7
Sample B Male 53.6
Sample C Female 76.6
Sample D Female 85.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68196930 Antisense, RP_041116_01_F09, Mouse strain C57BL/6J (56 days, male) 0.1

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