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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:81.7 nTPM
HPA:81.7 nTPM
GTEx:148.3 nTPM
FANTOM5:177.2 Scaled Tags Per Million
Pig:50.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 81.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 81.7
1981 Female, age 72, midline 85.1
2565 Male, age 75, midline 85.1
2048 Male, age 55, midline 83.6
2816 Male, age 47, midline 79.5
2194 Female, age 79, both hemispheres 75.3
Cervical spinal cord, dorsal horn
nTPM: 81.5
2173 Female, age 72, unknown 91.1
2296 Male, age 66, both hemispheres 81.9
2069 Male, age 47, both hemispheres 81.3
2721 Male, age 90, both hemispheres 79.1
2297 Male, age 75, both hemispheres 78.1
1877 Male, age 55, unknown 77.3
Cervical spinal cord, ventral horn
nTPM: 79.4
2098 Female, age 72, unknown 88.3
2480 Male, age 75, both hemispheres 80.9
2295 Male, age 66, both hemispheres 80.8
2809 Male, age 90, both hemispheres 77.3
2068 Male, age 55, unknown 75.7
2820 Female, age 79, both hemispheres 73.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 148.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 148.3
Samples: 159

Max nTPM: 244.0
Min nTPM: 78.5
Std nTPM: 29.0
Median nTPM: 151.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 244.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 213.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 213.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 210.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 208.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 206.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 204.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 202.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 202.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 202.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 201.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 192.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 190.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 189.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 188.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 186.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 184.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 184.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 181.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 179.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 178.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 178.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 175.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 174.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 174.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 172.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 171.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 171.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 171.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 171.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 170.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 170.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 170.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 169.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 167.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 167.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 167.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 165.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 165.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 165.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 164.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 164.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 163.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 163.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 163.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 162.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 162.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 162.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 161.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 161.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 161.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 160.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 160.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 160.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 160.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 160.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 159.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 159.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 159.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 158.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 157.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 157.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 157.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 156.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 156.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 156.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 155.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 155.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 155.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 155.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 155.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 154.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 154.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 153.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 152.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 152.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 152.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 151.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 151.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 151.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 151.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 149.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 149.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 148.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 148.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 148.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 147.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 147.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 146.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 145.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 145.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 144.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 142.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 141.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 140.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 139.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 138.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 138.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 137.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 136.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 135.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 135.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 135.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 134.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 134.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 132.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 132.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 132.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 131.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 131.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 130.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 127.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 126.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 126.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 126.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 125.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 124.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 124.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 124.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 124.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 123.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 122.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 121.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 121.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 121.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 121.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 121.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 121.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 120.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 120.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 119.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 118.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 118.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 118.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 117.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 116.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 116.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 115.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 114.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 112.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 112.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 112.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 111.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 110.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 110.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 110.0
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 109.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 109.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 109.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 109.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 106.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 106.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 106.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 103.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 99.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 99.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 97.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 84.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 78.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 177.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 177.2
FF:10181-103D1 60 years, female 206.1
FF:10159-103A6 76 years, female 148.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 45.6
Samples: 4

Max nTPM: 46.9
Min nTPM: 43.7
Sample A Female 46.2
Sample B Female 45.6
Sample C Male 46.9
Sample D Male 43.7
Ventral spinal cord
nTPM: 50.0
Samples: 4

Max nTPM: 53.1
Min nTPM: 44.2
Sample A Female 44.2
Sample B Female 53.1
Sample C Male 53.0
Sample D Male 49.7

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