HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:171.5 nTPM
HPA:171.5 nTPM
GTEx:361.6 nTPM
FANTOM5:111.2 Scaled Tags Per Million
Pig:166.0 nTPM
Mouse:161.4 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035029Antibody CAB012477
Glial cells MediumMedium
Neuronal cells -High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 171.5
Sample id Sample description nTPM
Hippocampus
nTPM: 170.9
1898 Male, age 80, left hemisphere 177.2
2529 Female, age 94, left hemisphere 173.7
2621 Female, age 67, right hemisphere 172.0
1855 Male, age 76, left hemisphere 168.5
1911 Female, age 85, right hemisphere 167.9
2148 Female, age 91, left hemisphere 165.8
Dentate gyrus
nTPM: 171.2
2530 Female, age 94, left hemisphere 182.7
2010 Male, age 76, both hemispheres 174.5
2246 Female, age 85, both hemispheres 169.4
2531 Female, age 67, both hemispheres 168.3
1927 Female, age 91, both hemispheres 167.5
2528 Male, age 74, both hemispheres 164.7
Entorhinal gyrus
nTPM: 170.4
2686 Male, age 75, right hemisphere 176.2
2117 Female, age 91, right hemisphere 171.3
1787 Male, age 76, left hemisphere 170.2
1938 Female, age 85, left hemisphere 169.3
2764 Male, age 80, right hemisphere 169.1
2613 Female, age 94, left hemisphere 166.2
Hippocampus, CA1
nTPM: 169.8
2045 Male, age 76, both hemispheres 171.4
2749 Male, age 80, left hemisphere 171.4
2082 Female, age 91, right hemisphere 169.2
1873 Female, age 85, both hemispheres 168.6
2527 Male, age 74, both hemispheres 168.3
Hippocampus, CA2
nTPM: 171.5
1892 Male, age 76, both hemispheres 175.4
1963 Male, age 80, left hemisphere 174.2
2249 Male, age 74, both hemispheres 172.9
2437 Female, age 94, left hemisphere 171.1
2113 Female, age 91, right hemisphere 168.1
1940 Female, age 85, left hemisphere 167.0
Hippocampus, CA3
nTPM: 169.4
2436 Male, age 74, both hemispheres 177.4
1867 Male, age 76, both hemispheres 176.7
1891 Female, age 85, both hemispheres 170.5
2137 Male, age 80, left hemisphere 169.1
2861 Female, age 67, both hemispheres 165.3
2620 Female, age 94, left hemisphere 157.6
Parahippocampal cortex
nTPM: 168.9
2018 Male, age 76, both hemispheres 175.9
2250 Female, age 67, right hemisphere 172.0
1850 Male, age 80, both hemispheres 170.2
2245 Female, age 91, both hemispheres 170.0
1990 Female, age 91, right hemisphere 169.6
2532 Female, age 72, left hemisphere 168.2
2692 Male, age 74, both hemispheres 168.1
1933 Female, age 85, both hemispheres 167.0
2622 Female, age 67, right hemisphere 164.8
2693 Female, age 94, both hemispheres 163.1
Perirhinal gyrus
nTPM: 170.4
1847 Female, age 91, left hemisphere 174.5
1841 Female, age 85, right hemisphere 171.7
2848 Male, age 76, right hemisphere 171.3
1794 Male, age 80, right hemisphere 167.3
2521 Female, age 94, right hemisphere 167.1
Subiculum
nTPM: 171.0
2438 Female, age 94, left hemisphere 175.7
1977 Female, age 85, both hemispheres 174.1
1901 Male, age 80, both hemispheres 172.5
2042 Male, age 76, both hemispheres 172.3
2729 Female, age 91, right hemisphere 166.4
2619 Male, age 74, both hemispheres 164.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 361.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 361.6
Samples: 197

Max nTPM: 953.1
Min nTPM: 171.9
Std nTPM: 121.9
Median nTPM: 333.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 953.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 809.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 734.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 692.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 684.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 669.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 647.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 616.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 607.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 597.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 580.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.2
FF:10169-103B7 60 years, female 123.4
FF:10153-102I9 76 years, female 99.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 166.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 166.0
Samples: 4

Max nTPM: 232.4
Min nTPM: 114.3
Sample A Female 232.4
Sample B Female 156.3
Sample C Male 161.0
Sample D Male 114.3
Entorhinal cortex
nTPM: 135.9
Samples: 4

Max nTPM: 168.5
Min nTPM: 103.5
Sample A Female 124.5
Sample B Female 168.5
Sample C Male 146.9
Sample D Male 103.5
Subiculum
nTPM: 146.0
Samples: 4

Max nTPM: 203.5
Min nTPM: 118.5
Sample A Female 203.5
Sample B Female 136.7
Sample C Male 118.5
Sample D Male 125.4
Ventral hippocampus
nTPM: 153.1
Samples: 4

Max nTPM: 174.4
Min nTPM: 126.6
Sample A Female 157.5
Sample B Female 126.6
Sample C Male 174.4
Sample D Male 153.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 161.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 148.6
Samples: 4

Max nTPM: 158.8
Min nTPM: 140.6
Sample A Male 140.9
Sample B Male 154.2
Sample C Female 158.8
Sample D Female 140.6
Hippocampal formation
nTPM: 161.4
Samples: 4

Max nTPM: 172.4
Min nTPM: 148.0
Sample A Male 172.4
Sample B Male 148.0
Sample C Female 166.7
Sample D Female 158.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
75934526 Antisense, RP_060530_01_E02, Mouse strain C57BL/6J (56 days, male) 10.7
68443148 Antisense, RP_050111_01_D10, Mouse strain C57BL/6J (56 days, male) 6.4

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