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EEF1B2
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:185.0 nTPM
HPA:185.0 nTPM
FANTOM5:165.3 Scaled Tags Per Million
Pig:161.2 nTPM
Allen mouse:4.6 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 185.0
Sample id Sample description nTPM
Area postrema
nTPM: 178.5
2799 Male, age 61, both hemispheres 185.1
2306 Male, age 80, both hemispheres 183.3
2054 Male, age 76, both hemispheres 166.9
Cuneate nuclei
nTPM: 175.3
2381 Male, age 80, both hemispheres 177.2
2376 Male, age 61, both hemispheres 177.1
2131 Male, age 76, both hemispheres 171.6
Dorsal medullary reticular nucleus
nTPM: 176.6
2373 Male, age 61, both hemispheres 180.3
2040 Female, age 85, both hemispheres 179.4
2088 Male, age 76, both hemispheres 170.0
Dorsal motor vagal complex
nTPM: 177.8
2797 Male, age 61, both hemispheres 194.8
2133 Female, age 91, both hemispheres 180.6
2807 Female, age 85, both hemispheres 180.3
2643 Male, age 74, both hemispheres 179.5
2844 Male, age 55, unknown 174.2
2000 Male, age 74, unknown 174.0
2813 Female, age 72, unknown 171.5
2185 Male, age 76, both hemispheres 167.4
Gigantocellular reticular nuclei, medullary
nTPM: 177.8
2314 Male, age 61, both hemispheres 184.1
2310 Male, age 80, both hemispheres 178.9
2387 Female, age 91, both hemispheres 178.5
1876 Female, age 85, both hemispheres 178.4
2022 Male, age 76, right hemisphere 175.1
2462 Male, age 74, both hemispheres 171.6
Gigantocellular reticular nuclei, pars
nTPM: 174.4
2084 Female, age 85, both hemispheres 180.1
2168 Male, age 76, both hemispheres 174.6
2336 Male, age 61, both hemispheres 172.6
2706 Male, age 80, both hemispheres 172.6
2330 Male, age 80, both hemispheres 172.1
Inferior olive
nTPM: 180.4
2379 Male, age 80, both hemispheres 181.2
2628 Female, age 91, both hemispheres 180.5
2085 Female, age 85, both hemispheres 180.4
2178 Male, age 61, both hemispheres 180.2
2563 Male, age 74, both hemispheres 179.7
Lateral medullary reticular nucleus
nTPM: 181.4
2852 Male, age 80, both hemispheres 186.8
2804 Female, age 91, both hemispheres 183.4
2190 Female, age 85, both hemispheres 183.2
2305 Male, age 74, both hemispheres 180.9
2374 Male, age 61, both hemispheres 178.8
2044 Male, age 76, both hemispheres 175.2
Medial vestibular nucleus
nTPM: 177.4
2803 Female, age 91, both hemispheres 182.1
2624 Male, age 61, both hemispheres 178.6
2743 Female, age 85, both hemispheres 177.6
2093 Male, age 80, both hemispheres 176.9
2801 Male, age 74, both hemispheres 175.9
2134 Male, age 76, both hemispheres 173.5
Motor hypoglossal nucleus
nTPM: 176.8
2132 Female, age 85, both hemispheres 185.2
2125 Female, age 91, both hemispheres 180.2
2182 Male, age 80, both hemispheres 178.8
2461 Male, age 61, both hemispheres 173.1
2277 Male, age 76, both hemispheres 166.5
Nucleus ambiguus
nTPM: 176.5
2071 Male, age 76, both hemispheres 178.5
2096 Female, age 85, both hemispheres 174.4
Nucleus cuneatus
nTPM: 178.2
2808 Female, age 85, both hemispheres 183.7
2805 Female, age 91, both hemispheres 182.2
2380 Male, age 80, both hemispheres 181.8
2564 Male, age 74, both hemispheres 178.9
2562 Male, age 61, both hemispheres 173.8
2100 Male, age 76, both hemispheres 169.0
Nucleus gracilis
nTPM: 180.1
2382 Male, age 80, both hemispheres 183.0
2299 Female, age 85, both hemispheres 179.8
2627 Male, age 74, both hemispheres 177.4
Nucleus raphe magnus
nTPM: 173.4
2459 Female, age 91, both hemispheres 175.8
2051 Male, age 76, both hemispheres 175.2
2328 Male, age 80, both hemispheres 174.1
2172 Female, age 85, both hemispheres 172.7
2160 Male, age 61, both hemispheres 171.7
2455 Male, age 74, both hemispheres 171.1
Nucleus raphe obscurus
nTPM: 182.4
2845 Female, age 85, midline 184.8
2800 Male, age 61, midline 183.3
2142 Male, age 76, midline 179.1
Nucleus raphe pallidus
nTPM: 185.0
1924 Male, age 61, midline 193.5
2183 Male, age 80, midline 182.8
2145 Male, age 76, midline 178.6
Nucleus tractus solitarii
nTPM: 172.8
2191 Female, age 85, both hemispheres 176.8
2144 Female, age 91, right hemisphere 176.5
2656 Male, age 76, both hemispheres 170.4
2307 Male, age 80, both hemispheres 167.6
Parvicellular reticular nuclei
nTPM: 177.2
2119 Male, age 80, both hemispheres 180.8
2095 Male, age 76, both hemispheres 178.7
2558 Male, age 74, both hemispheres 172.1
Parvicellular reticular nuclei, medullary
nTPM: 177.7
2091 Female, age 85, both hemispheres 180.0
2189 Female, age 91, both hemispheres 178.6
2181 Male, age 80, left hemisphere 174.5
Peritrigeminal nucleus
nTPM: 181.8
2067 Female, age 85, both hemispheres 187.9
2136 Male, age 76, both hemispheres 182.7
2179 Male, age 61, both hemispheres 174.8
Prepositus hypoglossal nucleus
nTPM: 180.0
2855 Female, age 85, right hemisphere 182.3
2086 Male, age 80, both hemispheres 177.6
Spinal trigeminal nucleus, caudal
nTPM: 175.6
2390 Female, age 91, both hemispheres 178.1
2308 Male, age 80, both hemispheres 177.0
2642 Male, age 74, both hemispheres 176.2
2312 Male, age 61, both hemispheres 174.8
2447 Male, age 76, both hemispheres 171.9
Spinal trigeminal nucleus, interpolar
nTPM: 179.5
2066 Male, age 76, right hemisphere 181.3
2625 Male, age 61, both hemispheres 180.7
2033 Male, age 80, both hemispheres 179.0
2386 Female, age 85, both hemispheres 178.5
2389 Female, age 91, both hemispheres 178.2
Spinal vestibular nucleus
nTPM: 182.2
2384 Male, age 74, both hemispheres 190.8
2806 Female, age 85, both hemispheres 183.2
2796 Male, age 61, both hemispheres 182.3
2780 Male, age 80, both hemispheres 182.1
2748 Male, age 76, both hemispheres 179.1
2186 Female, age 91, both hemispheres 175.5
Ventral medullary reticular nucleus
nTPM: 177.6
2372 Male, age 61, both hemispheres 182.8
2060 Male, age 76, both hemispheres 172.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 182.9
2118 Male, age 80, both hemispheres 188.9
2302 Female, age 91, both hemispheres 184.3
2741 Female, age 85, both hemispheres 183.7
1986 Male, age 76, both hemispheres 179.2
2180 Male, age 61, both hemispheres 178.7

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 165.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 165.3
FF:10174-103C3 60 years, female 269.8
FF:10155-103A2 76 years, female 123.8
FF:10038-101F2 18-64 years, mixed 102.1

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 161.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 161.3
Samples: 4

Max nTPM: 186.0
Min nTPM: 137.5
Sample A Female 139.8
Sample B Female 137.5
Sample C Male 181.7
Sample D Male 186.0

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.6
75934526 Antisense, RP_060530_01_E02, Mouse strain C57BL/6J (56 days, male) 8.5
68443148 Antisense, RP_050111_01_D10, Mouse strain C57BL/6J (56 days, male) 0.7

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