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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:404.9 nTPM
FANTOM5:666.8 Scaled Tags Per Million
Pig:370.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023977Antibody CAB005388
Glial cells HighHigh
Neuronal cells Not detectedHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 404.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 404.9
Samples: 246

Max nTPM: 1048.7
Min nTPM: 162.8
Std nTPM: 145.2
Median nTPM: 366.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1048.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 888.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 868.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 861.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 834.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 792.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 763.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 754.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 681.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 678.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 678.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 673.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 659.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 657.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 641.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 636.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 633.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 626.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 619.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 618.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 610.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 603.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 603.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 597.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 592.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 590.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 590.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 589.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 580.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 577.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 575.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 570.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 568.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 564.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 560.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 556.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 554.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 552.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 551.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 550.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 545.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 540.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 539.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 533.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 528.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 526.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 520.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 520.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 519.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 518.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 515.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 514.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 508.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 505.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 505.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 503.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 501.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 500.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 498.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 496.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 494.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 494.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 491.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 491.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 488.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 481.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 480.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 479.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 477.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 471.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 468.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 468.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 468.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 464.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 461.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 459.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 455.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 453.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 451.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 447.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 443.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 443.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 442.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 439.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 438.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 437.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 433.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 432.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 432.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 429.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 428.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 425.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 425.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 424.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 424.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 421.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 421.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 418.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 414.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 411.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 408.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 407.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 407.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 406.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 406.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 404.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 398.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 397.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 397.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 396.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 396.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 395.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 394.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 394.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 385.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 384.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 382.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 372.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 371.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 371.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 369.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 366.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 366.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 366.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 362.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 362.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 361.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 360.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 360.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 359.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 357.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 354.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 353.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 352.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 352.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 351.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 349.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 348.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 347.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 346.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 346.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 345.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 344.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 344.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 343.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 343.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 342.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 341.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 341.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 341.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 340.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 340.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 339.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 338.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 338.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 337.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 337.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 336.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 335.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 334.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 331.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 328.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 325.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 324.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 322.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 321.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 320.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 320.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 319.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 318.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 317.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 317.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 317.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 315.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 314.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 313.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 312.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 312.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 309.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 308.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 308.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 308.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 306.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 304.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 303.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 301.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 300.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 300.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 300.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 295.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 294.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 293.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 290.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 289.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 287.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 285.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 285.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 284.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 283.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 282.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 282.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 279.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 278.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 275.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 273.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 273.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 271.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 266.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 264.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 264.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 262.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 258.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 252.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 250.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 250.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 246.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 244.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 244.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 244.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 243.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 242.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 241.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 241.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 240.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 238.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 232.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 232.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 231.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 230.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 230.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 230.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 229.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 228.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 224.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 219.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 218.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 217.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 214.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 211.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 209.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 206.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 201.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 200.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 198.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 174.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 162.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 666.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 666.8
FF:10164-103B2 76 years, female 666.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 370.0
Pig sample Sample description nTPM
Caudate
nTPM: 370.0
Samples: 4

Max nTPM: 417.0
Min nTPM: 321.4
Sample A Female 384.9
Sample B Female 321.4
Sample C Male 417.0
Sample D Male 356.6

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