HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.9 nTPM
HPA:41.9 nTPM
GTEx:34.3 nTPM
FANTOM5:20.2 Scaled Tags Per Million
Pig:8.5 nTPM
Mouse:21.4 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049303
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.9
Sample id Sample description nTPM
Hippocampus
nTPM: 41.4
1898 Male, age 80, left hemisphere 42.3
1855 Male, age 76, left hemisphere 42.0
2529 Female, age 94, left hemisphere 41.7
1911 Female, age 85, right hemisphere 41.4
2621 Female, age 67, right hemisphere 40.7
2148 Female, age 91, left hemisphere 40.1
Dentate gyrus
nTPM: 41.0
2530 Female, age 94, left hemisphere 44.6
2010 Male, age 76, both hemispheres 44.0
2528 Male, age 74, both hemispheres 42.6
2246 Female, age 85, both hemispheres 39.6
1927 Female, age 91, both hemispheres 37.9
2531 Female, age 67, both hemispheres 37.6
Entorhinal gyrus
nTPM: 41.5
2117 Female, age 91, right hemisphere 45.7
2764 Male, age 80, right hemisphere 42.9
1938 Female, age 85, left hemisphere 41.8
1787 Male, age 76, left hemisphere 40.4
2613 Female, age 94, left hemisphere 39.1
2686 Male, age 75, right hemisphere 39.1
Hippocampus, CA1
nTPM: 40.3
2045 Male, age 76, both hemispheres 41.5
1873 Female, age 85, both hemispheres 40.1
2749 Male, age 80, left hemisphere 40.1
2082 Female, age 91, right hemisphere 39.9
2527 Male, age 74, both hemispheres 39.8
Hippocampus, CA2
nTPM: 41.1
2249 Male, age 74, both hemispheres 42.9
1963 Male, age 80, left hemisphere 42.3
1892 Male, age 76, both hemispheres 41.4
2437 Female, age 94, left hemisphere 40.7
2113 Female, age 91, right hemisphere 40.1
1940 Female, age 85, left hemisphere 39.3
Hippocampus, CA3
nTPM: 40.1
1867 Male, age 76, both hemispheres 43.0
1891 Female, age 85, both hemispheres 42.4
2620 Female, age 94, left hemisphere 40.4
2861 Female, age 67, both hemispheres 39.2
2137 Male, age 80, left hemisphere 37.8
2436 Male, age 74, both hemispheres 37.5
Parahippocampal cortex
nTPM: 39.5
2018 Male, age 76, both hemispheres 43.0
2692 Male, age 74, both hemispheres 41.1
1990 Female, age 91, right hemisphere 40.5
1933 Female, age 85, both hemispheres 39.7
1850 Male, age 80, both hemispheres 39.1
2532 Female, age 72, left hemisphere 39.1
2250 Female, age 67, right hemisphere 38.5
2622 Female, age 67, right hemisphere 38.3
2245 Female, age 91, both hemispheres 38.2
2693 Female, age 94, both hemispheres 37.8
Perirhinal gyrus
nTPM: 38.3
1841 Female, age 85, right hemisphere 38.9
1847 Female, age 91, left hemisphere 38.8
2848 Male, age 76, right hemisphere 38.8
1794 Male, age 80, right hemisphere 38.2
2521 Female, age 94, right hemisphere 36.7
Subiculum
nTPM: 41.9
2042 Male, age 76, both hemispheres 43.6
1901 Male, age 80, both hemispheres 43.4
1977 Female, age 85, both hemispheres 41.9
2619 Male, age 74, both hemispheres 41.4
2729 Female, age 91, right hemisphere 41.1
2438 Female, age 94, left hemisphere 39.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.3
Samples: 197

Max nTPM: 71.5
Min nTPM: 22.0
Std nTPM: 7.5
Median nTPM: 33.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 71.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 66.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 59.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 55.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 54.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 50.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 48.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 48.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 48.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 46.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.2
FF:10153-102I9 76 years, female 21.7
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.9
Sample A Female 10.6
Sample B Female 8.0
Sample C Male 8.6
Sample D Male 6.9
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.2
Sample A Female 6.3
Sample B Female 6.1
Sample C Male 6.6
Sample D Male 5.2
Subiculum
nTPM: 7.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.0
Sample A Female 8.7
Sample B Female 7.0
Sample C Male 6.7
Sample D Male 6.0
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 10.0
Min nTPM: 5.9
Sample A Female 7.2
Sample B Female 5.9
Sample C Male 10.0
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 23.1
Min nTPM: 17.1
Sample A Male 23.1
Sample B Male 20.4
Sample C Female 17.4
Sample D Female 17.1
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 21.1
Sample C Female 22.1
Sample D Female 21.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
227165 Antisense, RP_040604_02_C01, Mouse strain C57BL/6J (56 days, male) 12.4
74990522 Antisense, RP_060410_01_C05, Mouse strain C57BL/6J (56 days, male) 6.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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