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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:366.0 nTPM
FANTOM5:116.7 Scaled Tags Per Million
Pig:140.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA004190Antibody CAB005870
Glial cells MediumLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 366.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 366.0
Samples: 246

Max nTPM: 794.9
Min nTPM: 224.2
Std nTPM: 84.4
Median nTPM: 348.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 794.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 747.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 743.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 716.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 700.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 605.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 597.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 580.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 528.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 514.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 513.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 512.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 508.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 504.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 495.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 494.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 489.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 486.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 477.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 476.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 475.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 474.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 473.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 462.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 461.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 461.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 449.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 448.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 443.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 442.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 441.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 440.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 440.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 439.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 436.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 436.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 430.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 430.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 428.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 425.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 425.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 421.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 421.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 420.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 414.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 414.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 412.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 412.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 409.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 406.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 404.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 404.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 403.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 403.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 402.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 402.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 399.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 398.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 398.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 398.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 395.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 395.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 395.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 394.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 394.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 394.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 389.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 387.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 385.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 385.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 384.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 384.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 383.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 382.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 381.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 376.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 376.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 375.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 375.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 375.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 375.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 374.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 373.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 373.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 373.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 372.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 372.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 372.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 372.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 372.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 372.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 372.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 370.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 370.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 367.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 366.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 366.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 365.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 364.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 363.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 361.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 359.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 358.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 357.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 357.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 357.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 356.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 356.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 356.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 355.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 353.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 353.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 352.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 352.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 352.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 352.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 351.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 351.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 350.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 350.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 349.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 349.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 348.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 348.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 348.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 347.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 347.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 346.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 346.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 345.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 345.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 345.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 344.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 344.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 343.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 343.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 341.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 341.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 341.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 340.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 340.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 340.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 338.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 338.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 337.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 337.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 337.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 337.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 336.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 336.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 336.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 335.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 334.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 334.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 333.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 333.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 333.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 333.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 332.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 332.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 331.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 331.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 329.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 329.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 329.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 327.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 327.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 327.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 327.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 326.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 326.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 325.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 325.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 324.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 324.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 323.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 323.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 322.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 322.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 321.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 320.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 319.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 319.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 317.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 317.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 316.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 315.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 314.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 313.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 313.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 312.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 311.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 311.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 309.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 306.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 306.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 305.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 304.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 304.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 304.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 303.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 302.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 301.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 300.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 300.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 300.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 298.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 298.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 298.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 296.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 294.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 293.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 292.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 292.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 291.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 289.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 288.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 287.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 287.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 285.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 283.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 282.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 282.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 280.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 279.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 278.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 277.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 273.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 272.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 271.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 270.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 268.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 268.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 268.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 266.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 265.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 259.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 257.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 256.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 256.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 256.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 254.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 253.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 250.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 245.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 224.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 116.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 116.7
FF:10164-103B2 76 years, female 116.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 140.1
Pig sample Sample description nTPM
Caudate
nTPM: 140.1
Samples: 4

Max nTPM: 171.7
Min nTPM: 117.2
Sample A Female 134.6
Sample B Female 136.8
Sample C Male 171.7
Sample D Male 117.2

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