HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.7 nTPM
HPA:34.7 nTPM
GTEx:48.8 nTPM
FANTOM5:93.8 Scaled Tags Per Million
Pig:31.8 nTPM
Mouse:99.5 nTPM
Allen mouse:9.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030554
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1898 Male, age 80, left hemisphere 40.1
2621 Female, age 67, right hemisphere 34.2
1855 Male, age 76, left hemisphere 29.9
2529 Female, age 94, left hemisphere 25.3
1911 Female, age 85, right hemisphere 25.2
2148 Female, age 91, left hemisphere 24.9
Dentate gyrus
nTPM: 28.6
2010 Male, age 76, both hemispheres 33.0
2530 Female, age 94, left hemisphere 32.1
1927 Female, age 91, both hemispheres 31.2
2531 Female, age 67, both hemispheres 26.2
2528 Male, age 74, both hemispheres 24.7
2246 Female, age 85, both hemispheres 24.3
Entorhinal gyrus
nTPM: 32.0
2686 Male, age 75, right hemisphere 40.4
2764 Male, age 80, right hemisphere 35.2
1938 Female, age 85, left hemisphere 30.9
1787 Male, age 76, left hemisphere 30.6
2613 Female, age 94, left hemisphere 28.8
2117 Female, age 91, right hemisphere 26.1
Hippocampus, CA1
nTPM: 31.0
2749 Male, age 80, left hemisphere 44.7
1873 Female, age 85, both hemispheres 31.2
2527 Male, age 74, both hemispheres 29.2
2045 Male, age 76, both hemispheres 26.8
2082 Female, age 91, right hemisphere 23.4
Hippocampus, CA2
nTPM: 30.6
1963 Male, age 80, left hemisphere 41.3
1892 Male, age 76, both hemispheres 41.1
2437 Female, age 94, left hemisphere 30.3
1940 Female, age 85, left hemisphere 25.3
2249 Male, age 74, both hemispheres 23.4
2113 Female, age 91, right hemisphere 22.0
Hippocampus, CA3
nTPM: 27.7
1867 Male, age 76, both hemispheres 32.6
2620 Female, age 94, left hemisphere 29.5
2137 Male, age 80, left hemisphere 29.3
1891 Female, age 85, both hemispheres 27.7
2861 Female, age 67, both hemispheres 26.4
2436 Male, age 74, both hemispheres 20.5
Parahippocampal cortex
nTPM: 29.5
1850 Male, age 80, both hemispheres 40.0
1933 Female, age 85, both hemispheres 32.6
2622 Female, age 67, right hemisphere 30.0
2693 Female, age 94, both hemispheres 30.0
2692 Male, age 74, both hemispheres 29.8
1990 Female, age 91, right hemisphere 29.4
2245 Female, age 91, both hemispheres 28.3
2532 Female, age 72, left hemisphere 27.8
2018 Male, age 76, both hemispheres 26.2
2250 Female, age 67, right hemisphere 20.5
Perirhinal gyrus
nTPM: 34.7
1847 Female, age 91, left hemisphere 41.1
1794 Male, age 80, right hemisphere 39.2
1841 Female, age 85, right hemisphere 33.5
2848 Male, age 76, right hemisphere 31.6
2521 Female, age 94, right hemisphere 27.9
Subiculum
nTPM: 27.3
1977 Female, age 85, both hemispheres 30.7
1901 Male, age 80, both hemispheres 30.4
2619 Male, age 74, both hemispheres 28.7
2438 Female, age 94, left hemisphere 27.9
2042 Male, age 76, both hemispheres 23.9
2729 Female, age 91, right hemisphere 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.8
Samples: 197

Max nTPM: 83.7
Min nTPM: 28.5
Std nTPM: 8.6
Median nTPM: 47.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 83.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 76.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 75.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 73.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 72.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 68.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 68.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 67.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 67.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 67.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 65.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.8
FF:10169-103B7 60 years, female 119.2
FF:10153-102I9 76 years, female 68.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 40.9
Min nTPM: 22.2
Sample A Female 40.9
Sample B Female 32.9
Sample C Male 31.5
Sample D Male 22.2
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 30.3
Min nTPM: 25.6
Sample A Female 29.0
Sample B Female 29.4
Sample C Male 30.3
Sample D Male 25.6
Subiculum
nTPM: 29.0
Samples: 4

Max nTPM: 36.8
Min nTPM: 23.3
Sample A Female 36.8
Sample B Female 26.6
Sample C Male 29.3
Sample D Male 23.3
Ventral hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 40.4
Min nTPM: 22.9
Sample A Female 30.6
Sample B Female 22.9
Sample C Male 40.4
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.8
Samples: 4

Max nTPM: 107.4
Min nTPM: 86.8
Sample A Male 92.6
Sample B Male 86.8
Sample C Female 88.2
Sample D Female 107.4
Hippocampal formation
nTPM: 99.5
Samples: 4

Max nTPM: 106.1
Min nTPM: 94.4
Sample A Male 94.4
Sample B Male 102.7
Sample C Female 106.1
Sample D Female 94.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.4
70946526 Antisense, RP_050505_01_D05, Mouse strain C57BL/6J (56 days, male) 12.2
74882657 Antisense, RP_060315_04_F12, Mouse strain C57BL/6J (56 days, male) 6.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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