HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:43.6 nTPM
HPA:43.6 nTPM
GTEx:40.8 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:35.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.6
Sample id Sample description nTPM
Hippocampus
nTPM: 36.1
1898 Male, age 80, left hemisphere 40.9
1855 Male, age 76, left hemisphere 36.9
2621 Female, age 67, right hemisphere 36.8
2529 Female, age 94, left hemisphere 34.6
1911 Female, age 85, right hemisphere 34.1
2148 Female, age 91, left hemisphere 33.5
Dentate gyrus
nTPM: 36.9
2010 Male, age 76, both hemispheres 48.6
1927 Female, age 91, both hemispheres 40.7
2531 Female, age 67, both hemispheres 33.8
2246 Female, age 85, both hemispheres 33.5
2528 Male, age 74, both hemispheres 32.6
2530 Female, age 94, left hemisphere 32.5
Entorhinal gyrus
nTPM: 33.2
1938 Female, age 85, left hemisphere 34.9
2764 Male, age 80, right hemisphere 34.5
1787 Male, age 76, left hemisphere 33.2
2686 Male, age 75, right hemisphere 32.9
2117 Female, age 91, right hemisphere 32.3
2613 Female, age 94, left hemisphere 31.6
Hippocampus, CA1
nTPM: 43.6
2749 Male, age 80, left hemisphere 59.7
2045 Male, age 76, both hemispheres 55.8
1873 Female, age 85, both hemispheres 35.7
2082 Female, age 91, right hemisphere 34.0
2527 Male, age 74, both hemispheres 32.6
Hippocampus, CA2
nTPM: 37.9
1892 Male, age 76, both hemispheres 54.3
1963 Male, age 80, left hemisphere 39.2
2249 Male, age 74, both hemispheres 34.8
1940 Female, age 85, left hemisphere 33.3
2113 Female, age 91, right hemisphere 33.3
2437 Female, age 94, left hemisphere 32.5
Hippocampus, CA3
nTPM: 42.5
1867 Male, age 76, both hemispheres 64.8
2137 Male, age 80, left hemisphere 51.8
2436 Male, age 74, both hemispheres 36.9
2620 Female, age 94, left hemisphere 36.0
1891 Female, age 85, both hemispheres 33.2
2861 Female, age 67, both hemispheres 32.4
Parahippocampal cortex
nTPM: 34.4
2018 Male, age 76, both hemispheres 39.3
2245 Female, age 91, both hemispheres 36.7
1850 Male, age 80, both hemispheres 35.6
1990 Female, age 91, right hemisphere 35.4
2250 Female, age 67, right hemisphere 34.5
1933 Female, age 85, both hemispheres 34.1
2532 Female, age 72, left hemisphere 32.9
2693 Female, age 94, both hemispheres 32.8
2622 Female, age 67, right hemisphere 31.9
2692 Male, age 74, both hemispheres 30.9
Perirhinal gyrus
nTPM: 36.8
2848 Male, age 76, right hemisphere 38.3
1847 Female, age 91, left hemisphere 37.5
2521 Female, age 94, right hemisphere 36.6
1794 Male, age 80, right hemisphere 35.8
1841 Female, age 85, right hemisphere 35.7
Subiculum
nTPM: 37.6
2042 Male, age 76, both hemispheres 49.3
1901 Male, age 80, both hemispheres 41.3
2438 Female, age 94, left hemisphere 36.0
1977 Female, age 85, both hemispheres 34.8
2729 Female, age 91, right hemisphere 32.1
2619 Male, age 74, both hemispheres 32.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.8
Samples: 197

Max nTPM: 251.6
Min nTPM: 8.8
Std nTPM: 37.0
Median nTPM: 29.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 251.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 246.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 243.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 162.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 147.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 140.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 131.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 129.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 126.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 126.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 104.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.3
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 32.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 28.1
Min nTPM: 18.1
Sample A Female 21.5
Sample B Female 25.3
Sample C Male 18.1
Sample D Male 28.1
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 42.1
Min nTPM: 23.6
Sample A Female 42.1
Sample B Female 30.5
Sample C Male 28.8
Sample D Male 23.6
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 27.1
Min nTPM: 17.5
Sample A Female 27.1
Sample B Female 17.5
Sample C Male 21.4
Sample D Male 26.9
Ventral hippocampus
nTPM: 21.2
Samples: 4

Max nTPM: 29.8
Min nTPM: 14.7
Sample A Female 18.8
Sample B Female 21.4
Sample C Male 29.8
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 38.7
Min nTPM: 34.4
Sample A Male 36.1
Sample B Male 38.7
Sample C Female 34.4
Sample D Female 34.4
Hippocampal formation
nTPM: 26.2
Samples: 4

Max nTPM: 33.4
Min nTPM: 22.1
Sample A Male 33.4
Sample B Male 22.1
Sample C Female 22.9
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71724666 Antisense, RP_050921_01_D08, Mouse strain C57BL/6J (56 days, male) 0.3
73635771 Antisense, RP_050921_01_D08, Mouse strain C57BL/6J (56 days, male) 0.1

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