HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:27.5 nTPM
HPA:27.5 nTPM
GTEx:16.3 nTPM
FANTOM5:38.9 Scaled Tags Per Million
Mouse:27.1 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.5
Sample id Sample description nTPM
Hippocampus
nTPM: 24.0
1898 Male, age 80, left hemisphere 25.9
2529 Female, age 94, left hemisphere 25.1
1855 Male, age 76, left hemisphere 24.2
2621 Female, age 67, right hemisphere 23.4
2148 Female, age 91, left hemisphere 23.0
1911 Female, age 85, right hemisphere 22.2
Dentate gyrus
nTPM: 24.2
1927 Female, age 91, both hemispheres 25.9
2010 Male, age 76, both hemispheres 25.5
2528 Male, age 74, both hemispheres 24.2
2246 Female, age 85, both hemispheres 23.6
2531 Female, age 67, both hemispheres 23.1
2530 Female, age 94, left hemisphere 22.8
Entorhinal gyrus
nTPM: 25.1
1938 Female, age 85, left hemisphere 27.2
2764 Male, age 80, right hemisphere 27.1
1787 Male, age 76, left hemisphere 26.1
2613 Female, age 94, left hemisphere 23.7
2117 Female, age 91, right hemisphere 23.4
2686 Male, age 75, right hemisphere 22.9
Hippocampus, CA1
nTPM: 25.0
2749 Male, age 80, left hemisphere 27.8
1873 Female, age 85, both hemispheres 25.7
2045 Male, age 76, both hemispheres 24.3
2527 Male, age 74, both hemispheres 24.0
2082 Female, age 91, right hemisphere 23.6
Hippocampus, CA2
nTPM: 24.7
1892 Male, age 76, both hemispheres 27.0
1963 Male, age 80, left hemisphere 26.3
2249 Male, age 74, both hemispheres 24.4
2113 Female, age 91, right hemisphere 24.0
1940 Female, age 85, left hemisphere 23.4
2437 Female, age 94, left hemisphere 23.1
Hippocampus, CA3
nTPM: 24.0
1867 Male, age 76, both hemispheres 25.2
2137 Male, age 80, left hemisphere 24.7
1891 Female, age 85, both hemispheres 24.1
2436 Male, age 74, both hemispheres 23.8
2620 Female, age 94, left hemisphere 23.4
2861 Female, age 67, both hemispheres 22.7
Parahippocampal cortex
nTPM: 24.9
1850 Male, age 80, both hemispheres 28.6
1990 Female, age 91, right hemisphere 26.2
1933 Female, age 85, both hemispheres 25.9
2250 Female, age 67, right hemisphere 25.4
2018 Male, age 76, both hemispheres 24.8
2245 Female, age 91, both hemispheres 24.5
2532 Female, age 72, left hemisphere 24.0
2693 Female, age 94, both hemispheres 23.8
2692 Male, age 74, both hemispheres 23.5
2622 Female, age 67, right hemisphere 22.6
Perirhinal gyrus
nTPM: 27.5
1847 Female, age 91, left hemisphere 29.7
1794 Male, age 80, right hemisphere 27.9
1841 Female, age 85, right hemisphere 27.5
2848 Male, age 76, right hemisphere 27.1
2521 Female, age 94, right hemisphere 25.2
Subiculum
nTPM: 23.7
1977 Female, age 85, both hemispheres 26.4
1901 Male, age 80, both hemispheres 23.7
2729 Female, age 91, right hemisphere 23.6
2042 Male, age 76, both hemispheres 23.2
2619 Male, age 74, both hemispheres 22.8
2438 Female, age 94, left hemisphere 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 25.1
Min nTPM: 10.1
Std nTPM: 2.9
Median nTPM: 15.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 23.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 23.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 22.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 22.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 22.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 22.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 22.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 22.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.9
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 32.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 26.8
Min nTPM: 25.2
Sample A Male 25.2
Sample B Male 26.6
Sample C Female 25.8
Sample D Female 26.8
Hippocampal formation
nTPM: 27.2
Samples: 4

Max nTPM: 29.4
Min nTPM: 24.8
Sample A Male 26.8
Sample B Male 27.6
Sample C Female 29.4
Sample D Female 24.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69289303 Antisense, RP_050407_02_H09, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

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