PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:251.1 nTPM
HPA:251.1 nTPM
FANTOM5:77.6 Scaled Tags Per Million
Pig:89.9 nTPM
Mouse:483.9 nTPM
Allen mouse:17.8 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 251.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 218.4
2090 Male, age 80, both hemispheres 222.9
2188 Female, age 91, both hemispheres 221.7
1984 Male, age 76, both hemispheres 220.0
2301 Female, age 85, both hemispheres 209.1
Area postrema
nTPM: 209.6
2306 Male, age 80, both hemispheres 214.5
2054 Male, age 76, both hemispheres 212.4
2799 Male, age 61, both hemispheres 201.9
Cuneate nuclei
nTPM: 222.2
2131 Male, age 76, both hemispheres 229.7
2376 Male, age 61, both hemispheres 226.1
2381 Male, age 80, both hemispheres 210.8
Dorsal cochlear nucleus
nTPM: 221.5
2187 Female, age 91, both hemispheres 225.3
2370 Male, age 61, both hemispheres 223.7
2058 Male, age 76, both hemispheres 223.6
2802 Male, age 74, right hemisphere 219.0
2378 Male, age 80, both hemispheres 216.0
Dorsal medullary reticular nucleus
nTPM: 222.5
2040 Female, age 85, both hemispheres 240.4
2088 Male, age 76, both hemispheres 213.6
2373 Male, age 61, both hemispheres 213.6
Dorsal motor vagal complex
nTPM: 216.7
2133 Female, age 91, both hemispheres 238.3
2844 Male, age 55, unknown 230.5
2000 Male, age 74, unknown 226.2
2643 Male, age 74, both hemispheres 211.5
2185 Male, age 76, both hemispheres 210.4
2813 Female, age 72, unknown 207.4
2797 Male, age 61, both hemispheres 205.6
2807 Female, age 85, both hemispheres 204.2
Dorsal tegmental nucleus
nTPM: 217.4
2083 Male, age 80, both hemispheres 229.8
2326 Male, age 74, both hemispheres 220.5
1936 Male, age 76, left hemisphere 211.8
2358 Male, age 61, both hemispheres 207.7
Dorsolateral tegmental area
nTPM: 223.8
2751 Female, age 85, both hemispheres 233.1
2654 Male, age 80, both hemispheres 226.0
2360 Male, age 74, both hemispheres 223.6
2141 Male, age 76, both hemispheres 222.1
2337 Male, age 61, both hemispheres 214.2
Gigantocellular reticular nuclei, medullary
nTPM: 224.1
2462 Male, age 74, both hemispheres 242.7
1876 Female, age 85, both hemispheres 226.9
2387 Female, age 91, both hemispheres 222.0
2310 Male, age 80, both hemispheres 218.4
2314 Male, age 61, both hemispheres 218.3
2022 Male, age 76, right hemisphere 216.1
Gigantocellular reticular nuclei, pars
nTPM: 219.0
2168 Male, age 76, both hemispheres 233.7
2084 Female, age 85, both hemispheres 231.4
2336 Male, age 61, both hemispheres 217.4
2706 Male, age 80, both hemispheres 207.2
2330 Male, age 80, both hemispheres 205.1
Inferior olive
nTPM: 217.5
2085 Female, age 85, both hemispheres 223.6
2563 Male, age 74, both hemispheres 222.7
2178 Male, age 61, both hemispheres 220.4
2628 Female, age 91, both hemispheres 211.8
2379 Male, age 80, both hemispheres 209.0
Kolliker-Fuse nucleus
nTPM: 219.5
2163 Male, age 80, both hemispheres 224.7
2793 Female, age 91, left hemisphere 217.0
2315 Male, age 76, right hemisphere 216.8
Lateral lemniscal nuclei
nTPM: 230.3
2746 Female, age 85, left hemisphere 238.3
2036 Male, age 80, both hemispheres 236.9
2169 Male, age 76, both hemispheres 233.3
2453 Male, age 74, right hemisphere 228.2
2320 Female, age 91, left hemisphere 214.8
Lateral medullary reticular nucleus
nTPM: 226.0
2044 Male, age 76, both hemispheres 237.8
2305 Male, age 74, both hemispheres 237.3
2852 Male, age 80, both hemispheres 224.6
2804 Female, age 91, both hemispheres 221.9
2190 Female, age 85, both hemispheres 219.5
2374 Male, age 61, both hemispheres 214.9
Lateral parabrachial nucleus
nTPM: 224.0
2139 Female, age 85, right hemisphere 239.8
2013 Male, age 80, both hemispheres 227.7
2790 Male, age 61, both hemispheres 219.6
2792 Male, age 76, both hemispheres 208.7
Lateral vestibular nucleus
nTPM: 218.3
2184 Male, age 76, both hemispheres 220.3
2311 Male, age 80, both hemispheres 216.4
Locus coeruleus
nTPM: 251.1
2123 Female, age 91, both hemispheres 277.7
1980 Male, age 76, both hemispheres 268.3
2014 Male, age 55, unknown 263.8
2720 Male, age 74, both hemispheres 242.6
2317 Female, age 72, unknown 237.9
2788 Male, age 74, unknown 235.6
2162 Male, age 80, both hemispheres 231.7
Medial olivary nucleus
nTPM: 218.6
2138 Female, age 91, both hemispheres 225.1
1943 Male, age 61, both hemispheres 222.8
1962 Male, age 76, both hemispheres 214.6
2851 Male, age 80, both hemispheres 211.7
Medial parabrachial nucleus
nTPM: 222.9
2170 Female, age 91, both hemispheres 233.8
2463 Female, age 85, right hemisphere 226.4
2854 Male, age 80, both hemispheres 219.4
2786 Male, age 76, both hemispheres 218.1
2156 Male, age 61, both hemispheres 216.7
Medial periolivary nuclei
nTPM: 232.8
2063 Male, age 76, both hemispheres 250.5
2171 Female, age 85, both hemispheres 242.4
2791 Male, age 74, right hemisphere 234.8
2081 Male, age 80, both hemispheres 222.0
2458 Female, age 91, both hemispheres 214.4
Medial vestibular nucleus
nTPM: 229.4
2743 Female, age 85, both hemispheres 237.2
2801 Male, age 74, both hemispheres 230.7
2134 Male, age 76, both hemispheres 230.6
2093 Male, age 80, both hemispheres 229.0
2803 Female, age 91, both hemispheres 225.4
2624 Male, age 61, both hemispheres 223.7
Motor facial nucleus
nTPM: 226.1
2062 Male, age 76, both hemispheres 256.2
2365 Male, age 74, right hemisphere 234.9
2126 Male, age 61, both hemispheres 227.4
2697 Female, age 85, both hemispheres 214.2
2795 Female, age 91, both hemispheres 213.6
2327 Male, age 80, both hemispheres 210.4
Motor hypoglossal nucleus
nTPM: 224.5
2125 Female, age 91, both hemispheres 239.3
2132 Female, age 85, both hemispheres 233.8
2182 Male, age 80, both hemispheres 221.4
2277 Male, age 76, both hemispheres 217.9
2461 Male, age 61, both hemispheres 210.1
Motor trigeminal nucleus
nTPM: 221.3
2560 Male, age 74, both hemispheres 235.8
2079 Male, age 80, both hemispheres 225.9
2335 Male, age 61, both hemispheres 220.0
2309 Male, age 76, both hemispheres 213.5
2321 Female, age 91, both hemispheres 211.5
Nuclei of the trapezoid body
nTPM: 236.3
1983 Male, age 76, both hemispheres 251.5
2735 Female, age 85, both hemispheres 247.9
2159 Male, age 61, both hemispheres 244.8
2166 Male, age 80, both hemispheres 223.5
2368 Female, age 91, both hemispheres 213.9
Nucleus ambiguus
nTPM: 225.1
2096 Female, age 85, both hemispheres 232.7
2071 Male, age 76, both hemispheres 217.5
Nucleus cuneatus
nTPM: 216.5
2564 Male, age 74, both hemispheres 232.3
2100 Male, age 76, both hemispheres 219.2
2562 Male, age 61, both hemispheres 217.4
2380 Male, age 80, both hemispheres 217.0
2808 Female, age 85, both hemispheres 209.4
2805 Female, age 91, both hemispheres 203.3
Nucleus gracilis
nTPM: 215.8
2627 Male, age 74, both hemispheres 224.6
2382 Male, age 80, both hemispheres 214.7
2299 Female, age 85, both hemispheres 208.2
Nucleus raphe magnus
nTPM: 233.2
2160 Male, age 61, both hemispheres 254.8
2172 Female, age 85, both hemispheres 241.8
2455 Male, age 74, both hemispheres 234.9
2051 Male, age 76, both hemispheres 230.3
2459 Female, age 91, both hemispheres 219.6
2328 Male, age 80, both hemispheres 217.5
Nucleus raphe obscurus
nTPM: 218.5
2800 Male, age 61, midline 225.6
2845 Female, age 85, midline 222.9
2142 Male, age 76, midline 207.0
Nucleus raphe pallidus
nTPM: 220.6
2183 Male, age 80, midline 231.0
1924 Male, age 61, midline 227.5
2145 Male, age 76, midline 203.3
Nucleus tractus solitarii
nTPM: 215.7
2656 Male, age 76, both hemispheres 228.2
2144 Female, age 91, right hemisphere 218.1
2307 Male, age 80, both hemispheres 208.9
2191 Female, age 85, both hemispheres 207.7
Paramedian reticular nucleus
nTPM: 232.9
2050 Female, age 85, both hemispheres 246.4
2057 Male, age 80, both hemispheres 240.0
2313 Male, age 61, both hemispheres 237.9
2052 Male, age 76, both hemispheres 207.2
Parvicellular reticular nuclei
nTPM: 227.5
2119 Male, age 80, both hemispheres 232.3
2558 Male, age 74, both hemispheres 225.8
2095 Male, age 76, both hemispheres 224.5
Parvicellular reticular nuclei, medullary
nTPM: 226.0
2189 Female, age 91, both hemispheres 229.9
2091 Female, age 85, both hemispheres 229.4
2181 Male, age 80, left hemisphere 218.8
Peritrigeminal nucleus
nTPM: 235.4
2067 Female, age 85, both hemispheres 240.1
2136 Male, age 76, both hemispheres 233.9
2179 Male, age 61, both hemispheres 232.2
Pontine nuclei
nTPM: 243.6
2727 Male, age 61, right hemisphere 256.8
2787 Female, age 85, both hemispheres 255.6
1863 Male, age 55, unknown 253.4
2109 Female, age 72, unknown 253.2
2454 Male, age 74, left hemisphere 243.9
1968 Male, age 76, left hemisphere 242.0
2115 Male, age 80, left hemisphere 221.9
2319 Female, age 91, both hemispheres 221.9
Pontine raphe nucleus
nTPM: 234.0
2122 Female, age 85, midline 242.4
2853 Male, age 76, midline 225.6
Posteroventral cochlear nucleus
nTPM: 226.5
2752 Female, age 85, both hemispheres 239.4
2070 Male, age 76, both hemispheres 229.0
2135 Female, age 91, both hemispheres 224.7
2371 Male, age 61, both hemispheres 223.3
2341 Male, age 80, both hemispheres 216.1
Prepositus hypoglossal nucleus
nTPM: 228.2
2855 Female, age 85, right hemisphere 234.1
2086 Male, age 80, both hemispheres 222.3
Principal sensory trigeminal nucleus
nTPM: 227.1
2158 Male, age 61, both hemispheres 248.1
2008 Male, age 80, left hemisphere 231.9
2367 Female, age 91, left hemisphere 217.2
2324 Male, age 76, both hemispheres 211.1
Reticular pontine nucleus, caudal
nTPM: 223.4
2092 Male, age 76, both hemispheres 235.5
2559 Male, age 74, both hemispheres 222.3
2332 Male, age 80, right hemisphere 219.1
2457 Female, age 91, both hemispheres 216.8
Reticular pontine nucleus, oral
nTPM: 230.3
2361 Male, age 74, both hemispheres 250.2
2012 Female, age 85, both hemispheres 235.7
1939 Male, age 80, both hemispheres 230.8
2167 Male, age 76, both hemispheres 220.8
2366 Female, age 91, both hemispheres 213.8
Reticulotegmental nucleus
nTPM: 221.3
2452 Male, age 74, both hemispheres 229.1
2325 Male, age 76, both hemispheres 226.2
2333 Male, age 80, both hemispheres 215.7
2322 Female, age 91, both hemispheres 214.3
Spinal trigeminal nucleus, caudal
nTPM: 220.7
2447 Male, age 76, both hemispheres 232.7
2390 Female, age 91, both hemispheres 227.1
2308 Male, age 80, both hemispheres 216.5
2642 Male, age 74, both hemispheres 214.4
2312 Male, age 61, both hemispheres 212.9
Spinal trigeminal nucleus, interpolar
nTPM: 234.2
2066 Male, age 76, right hemisphere 263.6
2033 Male, age 80, both hemispheres 230.9
2625 Male, age 61, both hemispheres 230.5
2386 Female, age 85, both hemispheres 227.8
2389 Female, age 91, both hemispheres 218.3
Spinal trigeminal nucleus, oral
nTPM: 222.1
2737 Female, age 85, both hemispheres 228.2
2164 Male, age 80, both hemispheres 220.6
1978 Male, age 76, both hemispheres 217.6
Spinal vestibular nucleus
nTPM: 223.1
2780 Male, age 80, both hemispheres 230.6
2186 Female, age 91, both hemispheres 228.6
2748 Male, age 76, both hemispheres 222.5
2806 Female, age 85, both hemispheres 220.5
2796 Male, age 61, both hemispheres 219.8
2384 Male, age 74, both hemispheres 216.6
Subcoeruleus area
nTPM: 224.9
2323 Female, age 91, left hemisphere 229.7
2369 Female, age 85, left hemisphere 227.3
1958 Male, age 80, both hemispheres 224.5
2089 Male, age 76, left hemisphere 222.3
2451 Male, age 74, both hemispheres 220.9
Superior olive
nTPM: 227.6
1875 Female, age 85, both hemispheres 241.9
2364 Male, age 74, right hemisphere 241.8
2020 Male, age 76, both hemispheres 226.9
2561 Female, age 91, both hemispheres 213.9
2329 Male, age 80, right hemisphere 213.4
Superior vestibular nucleus
nTPM: 222.4
2061 Male, age 76, both hemispheres 224.2
2015 Male, age 80, both hemispheres 223.1
2383 Male, age 74, both hemispheres 219.8
Ventral medullary reticular nucleus
nTPM: 223.7
2372 Male, age 61, both hemispheres 224.6
2060 Male, age 76, both hemispheres 222.8
Ventral periolivary nuclei
nTPM: 222.9
2165 Male, age 80, both hemispheres 231.3
2130 Female, age 85, both hemispheres 228.5
2023 Male, age 76, both hemispheres 221.8
2794 Female, age 91, left hemisphere 209.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 230.9
2741 Female, age 85, both hemispheres 243.7
1986 Male, age 76, both hemispheres 240.4
2180 Male, age 61, both hemispheres 229.7
2118 Male, age 80, both hemispheres 222.8
2302 Female, age 91, both hemispheres 217.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 225.4
2449 Male, age 74, both hemispheres 233.5
2359 Male, age 61, both hemispheres 231.6
1959 Male, age 76, both hemispheres 226.6
2161 Male, age 80, both hemispheres 223.0
2840 Female, age 85, both hemispheres 219.4
2456 Female, age 91, both hemispheres 218.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 56.4
FF:10165-103B3 76 years, female 69.3
FF:10182-103D2 60 years, female 43.4
Medulla oblongata
Scaled Tags Per Million: 56.5
FF:10038-101F2 18-64 years, mixed 59.5
FF:10155-103A2 76 years, female 57.3
FF:10174-103C3 60 years, female 52.8
Pons
Scaled Tags Per Million: 77.6
FF:10033-101E6 18-54 years, mixed 77.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 89.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 73.7
Samples: 4

Max nTPM: 82.0
Min nTPM: 64.8
Sample A Female 64.8
Sample B Female 67.5
Sample C Male 82.0
Sample D Male 80.6
Pons
nTPM: 89.9
Samples: 4

Max nTPM: 109.7
Min nTPM: 72.5
Sample A Female 109.7
Sample B Female 72.5
Sample C Male 88.2
Sample D Male 89.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 483.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 483.9
Samples: 4

Max nTPM: 541.9
Min nTPM: 422.7
Sample A Male 487.3
Sample B Male 422.7
Sample C Female 541.9
Sample D Female 483.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.7
71608227 Antisense, RP_050927_01_C11, Mouse strain C57BL/6J (56 days, male) 18.6
293682 Antisense, RP_040604_02_H09, Mouse strain C57BL/6J (56 days, male) 14.8
Pons
Expression energy: 17.8
293682 Antisense, RP_040604_02_H09, Mouse strain C57BL/6J (56 days, male) 18.4
71608227 Antisense, RP_050927_01_C11, Mouse strain C57BL/6J (56 days, male) 17.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.