HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:151.7 nTPM
HPA:151.7 nTPM
GTEx:117.7 nTPM
FANTOM5:503.2 Scaled Tags Per Million
Pig:172.6 nTPM
Mouse:99.9 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051237Antibody CAB009849
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 151.7
Sample id Sample description nTPM
Hippocampus
nTPM: 151.7
2529 Female, age 94, left hemisphere 163.2
1855 Male, age 76, left hemisphere 157.7
1898 Male, age 80, left hemisphere 153.6
2148 Female, age 91, left hemisphere 150.5
1911 Female, age 85, right hemisphere 146.9
2621 Female, age 67, right hemisphere 138.2
Dentate gyrus
nTPM: 141.1
2010 Male, age 76, both hemispheres 157.7
2528 Male, age 74, both hemispheres 152.0
2246 Female, age 85, both hemispheres 147.1
1927 Female, age 91, both hemispheres 132.9
2530 Female, age 94, left hemisphere 132.1
2531 Female, age 67, both hemispheres 124.5
Entorhinal gyrus
nTPM: 137.9
2117 Female, age 91, right hemisphere 167.2
1787 Male, age 76, left hemisphere 149.2
1938 Female, age 85, left hemisphere 142.7
2686 Male, age 75, right hemisphere 134.4
2764 Male, age 80, right hemisphere 120.5
2613 Female, age 94, left hemisphere 113.6
Hippocampus, CA1
nTPM: 142.7
2527 Male, age 74, both hemispheres 164.2
1873 Female, age 85, both hemispheres 141.9
2082 Female, age 91, right hemisphere 141.6
2045 Male, age 76, both hemispheres 137.8
2749 Male, age 80, left hemisphere 128.0
Hippocampus, CA2
nTPM: 142.0
2249 Male, age 74, both hemispheres 175.6
1940 Female, age 85, left hemisphere 150.6
2113 Female, age 91, right hemisphere 146.1
2437 Female, age 94, left hemisphere 133.4
1963 Male, age 80, left hemisphere 124.2
1892 Male, age 76, both hemispheres 121.9
Hippocampus, CA3
nTPM: 137.0
2436 Male, age 74, both hemispheres 163.1
1891 Female, age 85, both hemispheres 144.5
1867 Male, age 76, both hemispheres 133.2
2137 Male, age 80, left hemisphere 132.2
2620 Female, age 94, left hemisphere 129.8
2861 Female, age 67, both hemispheres 119.3
Parahippocampal cortex
nTPM: 138.7
2250 Female, age 67, right hemisphere 172.8
2018 Male, age 76, both hemispheres 144.1
1933 Female, age 85, both hemispheres 142.5
2692 Male, age 74, both hemispheres 140.4
1990 Female, age 91, right hemisphere 135.6
2245 Female, age 91, both hemispheres 135.1
1850 Male, age 80, both hemispheres 131.5
2622 Female, age 67, right hemisphere 129.8
2693 Female, age 94, both hemispheres 127.7
2532 Female, age 72, left hemisphere 127.2
Perirhinal gyrus
nTPM: 132.9
2521 Female, age 94, right hemisphere 138.1
1841 Female, age 85, right hemisphere 136.9
1847 Female, age 91, left hemisphere 135.8
1794 Male, age 80, right hemisphere 128.4
2848 Male, age 76, right hemisphere 125.5
Subiculum
nTPM: 142.5
2729 Female, age 91, right hemisphere 161.9
2619 Male, age 74, both hemispheres 146.7
2042 Male, age 76, both hemispheres 144.5
2438 Female, age 94, left hemisphere 135.7
1901 Male, age 80, both hemispheres 134.7
1977 Female, age 85, both hemispheres 131.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 117.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 117.7
Samples: 197

Max nTPM: 434.0
Min nTPM: 49.5
Std nTPM: 53.0
Median nTPM: 106.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 434.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 331.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 307.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 289.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 277.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 275.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 274.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 247.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 206.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 204.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 198.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 503.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 503.2
FF:10169-103B7 60 years, female 526.3
FF:10153-102I9 76 years, female 480.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 172.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 172.6
Samples: 4

Max nTPM: 229.5
Min nTPM: 127.2
Sample A Female 229.5
Sample B Female 138.8
Sample C Male 194.8
Sample D Male 127.2
Entorhinal cortex
nTPM: 108.6
Samples: 4

Max nTPM: 127.3
Min nTPM: 82.6
Sample A Female 108.5
Sample B Female 115.9
Sample C Male 127.3
Sample D Male 82.6
Subiculum
nTPM: 154.7
Samples: 4

Max nTPM: 183.2
Min nTPM: 134.7
Sample A Female 183.2
Sample B Female 160.8
Sample C Male 140.2
Sample D Male 134.7
Ventral hippocampus
nTPM: 168.1
Samples: 4

Max nTPM: 201.8
Min nTPM: 142.0
Sample A Female 178.8
Sample B Female 142.0
Sample C Male 201.8
Sample D Male 149.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.9
Samples: 4

Max nTPM: 88.4
Min nTPM: 69.8
Sample A Male 79.6
Sample B Male 69.9
Sample C Female 88.4
Sample D Female 69.8
Hippocampal formation
nTPM: 99.9
Samples: 4

Max nTPM: 107.9
Min nTPM: 93.3
Sample A Male 99.8
Sample B Male 93.3
Sample C Female 98.5
Sample D Female 107.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
74822928 Antisense, RP_060321_01_A01, Mouse strain C57BL/6J (56 days, male) 3.5

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