HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:81.7 nTPM
HPA:81.7 nTPM
GTEx:55.4 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:58.1 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027124Antibody HPA027130
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.7
Sample id Sample description nTPM
Hippocampus
nTPM: 77.9
2148 Female, age 91, left hemisphere 80.7
1898 Male, age 80, left hemisphere 80.0
2621 Female, age 67, right hemisphere 78.9
1855 Male, age 76, left hemisphere 76.6
1911 Female, age 85, right hemisphere 76.6
2529 Female, age 94, left hemisphere 74.5
Dentate gyrus
nTPM: 78.1
1927 Female, age 91, both hemispheres 80.6
2531 Female, age 67, both hemispheres 79.4
2528 Male, age 74, both hemispheres 77.4
2246 Female, age 85, both hemispheres 77.1
2530 Female, age 94, left hemisphere 77.1
2010 Male, age 76, both hemispheres 77.0
Entorhinal gyrus
nTPM: 78.4
2764 Male, age 80, right hemisphere 80.8
2613 Female, age 94, left hemisphere 79.6
2686 Male, age 75, right hemisphere 79.1
1938 Female, age 85, left hemisphere 79.0
1787 Male, age 76, left hemisphere 76.8
2117 Female, age 91, right hemisphere 74.8
Hippocampus, CA1
nTPM: 78.6
2749 Male, age 80, left hemisphere 83.6
1873 Female, age 85, both hemispheres 78.3
2527 Male, age 74, both hemispheres 77.5
2045 Male, age 76, both hemispheres 77.2
2082 Female, age 91, right hemisphere 76.4
Hippocampus, CA2
nTPM: 78.3
1963 Male, age 80, left hemisphere 83.4
1892 Male, age 76, both hemispheres 79.9
2437 Female, age 94, left hemisphere 79.2
2249 Male, age 74, both hemispheres 77.5
2113 Female, age 91, right hemisphere 74.8
1940 Female, age 85, left hemisphere 74.7
Hippocampus, CA3
nTPM: 81.7
2436 Male, age 74, both hemispheres 85.6
2620 Female, age 94, left hemisphere 84.4
2137 Male, age 80, left hemisphere 83.0
2861 Female, age 67, both hemispheres 80.3
1867 Male, age 76, both hemispheres 78.8
1891 Female, age 85, both hemispheres 78.1
Parahippocampal cortex
nTPM: 77.7
2622 Female, age 67, right hemisphere 81.9
2692 Male, age 74, both hemispheres 80.5
1850 Male, age 80, both hemispheres 79.2
2693 Female, age 94, both hemispheres 77.8
2245 Female, age 91, both hemispheres 77.4
1933 Female, age 85, both hemispheres 77.0
2532 Female, age 72, left hemisphere 76.2
1990 Female, age 91, right hemisphere 75.9
2250 Female, age 67, right hemisphere 75.7
2018 Male, age 76, both hemispheres 75.2
Perirhinal gyrus
nTPM: 78.9
1847 Female, age 91, left hemisphere 82.1
1794 Male, age 80, right hemisphere 80.5
1841 Female, age 85, right hemisphere 78.2
2848 Male, age 76, right hemisphere 77.1
2521 Female, age 94, right hemisphere 76.8
Subiculum
nTPM: 77.2
2619 Male, age 74, both hemispheres 80.9
2438 Female, age 94, left hemisphere 78.6
2729 Female, age 91, right hemisphere 77.2
1901 Male, age 80, both hemispheres 77.0
1977 Female, age 85, both hemispheres 76.1
2042 Male, age 76, both hemispheres 73.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.4
Samples: 197

Max nTPM: 86.6
Min nTPM: 21.1
Std nTPM: 10.8
Median nTPM: 54.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 86.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 84.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 83.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 83.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 82.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 82.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 80.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 76.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 76.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 75.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 75.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10153-102I9 76 years, female 34.0
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 15.7
Min nTPM: 13.8
Sample A Female 15.7
Sample B Female 14.8
Sample C Male 13.8
Sample D Male 14.0
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 14.4
Min nTPM: 13.2
Sample A Female 14.2
Sample B Female 14.4
Sample C Male 13.3
Sample D Male 13.2
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 14.5
Min nTPM: 13.5
Sample A Female 14.5
Sample B Female 13.6
Sample C Male 13.5
Sample D Male 13.6
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 15.4
Min nTPM: 13.0
Sample A Female 13.9
Sample B Female 13.0
Sample C Male 15.4
Sample D Male 15.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.2
Samples: 4

Max nTPM: 54.3
Min nTPM: 49.0
Sample A Male 53.5
Sample B Male 52.0
Sample C Female 54.3
Sample D Female 49.0
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 59.4
Min nTPM: 56.6
Sample A Male 59.0
Sample B Male 59.4
Sample C Female 56.6
Sample D Female 57.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
68193029 Antisense, RP_040825_01_F02, Mouse strain C57BL/6J (56 days, male) 6.6

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