HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.3 nTPM
HPA:37.3 nTPM
GTEx:44.7 nTPM
FANTOM5:153.3 Scaled Tags Per Million
Pig:58.4 nTPM
Mouse:107.0 nTPM
Allen mouse:13.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041038
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.0
1898 Male, age 80, left hemisphere 37.1
2529 Female, age 94, left hemisphere 36.4
2621 Female, age 67, right hemisphere 33.7
2148 Female, age 91, left hemisphere 33.3
1855 Male, age 76, left hemisphere 32.2
1911 Female, age 85, right hemisphere 31.4
Dentate gyrus
nTPM: 33.6
2528 Male, age 74, both hemispheres 36.8
2530 Female, age 94, left hemisphere 36.1
2010 Male, age 76, both hemispheres 34.4
2246 Female, age 85, both hemispheres 32.7
1927 Female, age 91, both hemispheres 32.1
2531 Female, age 67, both hemispheres 29.3
Entorhinal gyrus
nTPM: 35.4
1938 Female, age 85, left hemisphere 38.1
2764 Male, age 80, right hemisphere 37.7
2117 Female, age 91, right hemisphere 36.7
1787 Male, age 76, left hemisphere 36.1
2613 Female, age 94, left hemisphere 32.8
2686 Male, age 75, right hemisphere 30.9
Hippocampus, CA1
nTPM: 36.2
2749 Male, age 80, left hemisphere 44.0
2527 Male, age 74, both hemispheres 38.3
1873 Female, age 85, both hemispheres 33.7
2045 Male, age 76, both hemispheres 33.3
2082 Female, age 91, right hemisphere 31.6
Hippocampus, CA2
nTPM: 35.3
1892 Male, age 76, both hemispheres 38.5
2249 Male, age 74, both hemispheres 38.5
1963 Male, age 80, left hemisphere 36.4
2437 Female, age 94, left hemisphere 33.7
2113 Female, age 91, right hemisphere 32.8
1940 Female, age 85, left hemisphere 32.1
Hippocampus, CA3
nTPM: 35.9
2137 Male, age 80, left hemisphere 45.1
1867 Male, age 76, both hemispheres 38.6
2436 Male, age 74, both hemispheres 35.9
1891 Female, age 85, both hemispheres 35.6
2620 Female, age 94, left hemisphere 31.5
2861 Female, age 67, both hemispheres 28.8
Parahippocampal cortex
nTPM: 35.2
1850 Male, age 80, both hemispheres 39.9
1990 Female, age 91, right hemisphere 37.5
2245 Female, age 91, both hemispheres 37.2
2250 Female, age 67, right hemisphere 37.1
2532 Female, age 72, left hemisphere 37.1
1933 Female, age 85, both hemispheres 36.4
2018 Male, age 76, both hemispheres 33.7
2692 Male, age 74, both hemispheres 31.9
2693 Female, age 94, both hemispheres 31.1
2622 Female, age 67, right hemisphere 29.9
Perirhinal gyrus
nTPM: 37.3
1841 Female, age 85, right hemisphere 38.9
1794 Male, age 80, right hemisphere 38.8
1847 Female, age 91, left hemisphere 38.5
2521 Female, age 94, right hemisphere 36.0
2848 Male, age 76, right hemisphere 34.5
Subiculum
nTPM: 36.7
1977 Female, age 85, both hemispheres 38.7
2619 Male, age 74, both hemispheres 37.5
1901 Male, age 80, both hemispheres 36.9
2438 Female, age 94, left hemisphere 36.4
2042 Male, age 76, both hemispheres 36.3
2729 Female, age 91, right hemisphere 34.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.7
Samples: 197

Max nTPM: 84.7
Min nTPM: 30.2
Std nTPM: 7.7
Median nTPM: 44.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 84.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 71.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 65.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 61.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 60.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 60.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 59.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 58.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 58.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 58.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 58.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.3
FF:10169-103B7 60 years, female 197.7
FF:10153-102I9 76 years, female 108.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.4
Samples: 4

Max nTPM: 69.7
Min nTPM: 47.1
Sample A Female 69.7
Sample B Female 56.5
Sample C Male 60.3
Sample D Male 47.1
Entorhinal cortex
nTPM: 50.5
Samples: 4

Max nTPM: 59.0
Min nTPM: 43.4
Sample A Female 46.7
Sample B Female 59.0
Sample C Male 52.7
Sample D Male 43.4
Subiculum
nTPM: 52.1
Samples: 4

Max nTPM: 66.6
Min nTPM: 44.1
Sample A Female 66.6
Sample B Female 48.8
Sample C Male 48.7
Sample D Male 44.1
Ventral hippocampus
nTPM: 49.7
Samples: 4

Max nTPM: 55.7
Min nTPM: 42.3
Sample A Female 51.1
Sample B Female 42.3
Sample C Male 49.8
Sample D Male 55.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 106.1
Samples: 4

Max nTPM: 109.6
Min nTPM: 100.3
Sample A Male 100.3
Sample B Male 109.6
Sample C Female 105.7
Sample D Female 108.7
Hippocampal formation
nTPM: 107.1
Samples: 4

Max nTPM: 112.7
Min nTPM: 98.7
Sample A Male 112.7
Sample B Male 109.9
Sample C Female 106.9
Sample D Female 98.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.9
73834102 Antisense, RP_050725_01_B09, Mouse strain C57BL/6J (56 days, male) 13.9
70928169 Antisense, RP_050725_01_B09, Mouse strain C57BL/6J (56 days, male) 12.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.