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RPS25
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:543.2 nTPM
FANTOM5:704.9 Scaled Tags Per Million
Pig:152.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA031801
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 543.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 543.2
Samples: 246

Max nTPM: 1292.6
Min nTPM: 222.5
Std nTPM: 144.3
Median nTPM: 526.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1292.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1071.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1022.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 997.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 987.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 958.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 955.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 931.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 908.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 863.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 834.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 816.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 813.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 801.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 784.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 761.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 750.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 746.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 746.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 745.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 738.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 730.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 721.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 711.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 704.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 700.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 698.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 689.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 687.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 685.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 681.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 678.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 677.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 672.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 671.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 669.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 668.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 665.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 664.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 661.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 661.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 660.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 659.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 657.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 654.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 647.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 644.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 642.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 639.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 634.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 629.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 625.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 623.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 617.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 615.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 614.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 611.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 608.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 606.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 606.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 606.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 605.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 604.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 599.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 596.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 595.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 592.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 589.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 587.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 585.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 583.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 582.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 581.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 578.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 577.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 576.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 576.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 572.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 571.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 570.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 570.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 570.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 568.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 567.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 566.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 563.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 563.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 562.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 560.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 559.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 555.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 555.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 554.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 554.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 554.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 554.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 554.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 553.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 552.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 551.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 551.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 550.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 548.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 547.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 545.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 543.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 541.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 541.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 540.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 540.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 538.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 536.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 535.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 534.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 534.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 533.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 533.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 533.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 532.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 532.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 530.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 529.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 527.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 526.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 523.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 522.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 522.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 520.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 518.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 516.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 514.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 513.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 512.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 511.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 508.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 507.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 502.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 500.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 500.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 499.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 499.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 497.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 495.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 495.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 494.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 493.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 491.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 489.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 487.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 486.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 486.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 484.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 483.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 479.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 479.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 478.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 478.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 478.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 476.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 475.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 474.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 474.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 474.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 474.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 473.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 473.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 472.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 470.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 470.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 469.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 468.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 463.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 461.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 459.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 456.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 456.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 453.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 453.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 450.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 449.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 448.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 447.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 446.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 445.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 445.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 444.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 443.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 441.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 441.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 439.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 438.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 438.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 436.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 436.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 433.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 433.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 430.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 429.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 426.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 425.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 423.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 422.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 422.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 422.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 421.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 420.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 418.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 416.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 413.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 413.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 412.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 411.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 410.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 410.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 405.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 403.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 402.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 401.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 400.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 398.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 397.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 395.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 392.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 390.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 390.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 389.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 387.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 382.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 381.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 376.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 372.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 372.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 370.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 368.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 364.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 361.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 357.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 350.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 347.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 344.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 341.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 339.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 336.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 331.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 246.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 222.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 704.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 704.9
FF:10164-103B2 76 years, female 704.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 152.7
Pig sample Sample description nTPM
Caudate
nTPM: 152.7
Samples: 4

Max nTPM: 165.2
Min nTPM: 137.4
Sample A Female 165.2
Sample B Female 146.1
Sample C Male 162.0
Sample D Male 137.4

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